Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04301 ATGAAGGAGAGTAAGATTGTGTCGGTTAAATTTCTGAAGGAAGCATCTGGAGTGGGAATAGATCCCAGTTCTGAGGCAGACTTTATTGAAGTGGATTCAAAAGTTGAACTGCCTTTTTGGCTGGCTCATGAGTTGCAGTTGAGACAAGCAGTATCAGTCTATGTTCCTCTTTGTTTCAATCAAAAAACAAGACTAGAGATCCAAGCTGATTGTGCAAGTGTGGATCTGAGGTCCAGATGTCCATACTTCTATGAATTTGGTTGCAAGATAGCACCCATAGTTGGCGATAGAACCATTGGAGTTCTGTTGTTGTCTGCATTTAGGAATAGGTACAAGGAGATCCTCACAAAGGCACACACTGCAGCAATTGCTGCTGGTTCTAAATTTTGGACTATTCTAACAAATGAGGAGATCAATTTGTATGAGACAGCTCAATCTGCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGCCCCAGATTTCAGATAGCTTCTATTCTTGGAAGAAAGAGAAAACCAGCTGAATAG 528 0.4205 MKESKIVSVKFLKEASGVGIDPSSEADFIEVDSKVELPFWLAHELQLRQAVSVYVPLCFNQKTRLEIQADCASVDLRSRCPYFYEFGCKIAPIVGDRTIGVLLLSAFRNRYKEILTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGRKRKPAE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04301 175 PANTHER UNCHARACTERIZED 3 173 IPR010492 -
Vivi3g04301 175 Gene3D - 1 156 IPR038437 -
Vivi3g04301 175 CDD GINS_B_Psf3 7 56 - -
Vivi3g04301 175 SUPERFAMILY PriA/YqbF domain 3 56 - -
Vivi3g04301 175 CDD GINS_A_psf3 51 157 - -
Vivi3g04301 175 SUPERFAMILY GINS helical bundle-like 55 156 IPR036224 -
Vivi3g04301 175 Pfam GINS complex protein 35 137 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04301 Vivi-Chr3 77130166 77134180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04301 3 172 Core DNA Replication Machinery Family AT3G55490 67.059 1.92e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04301 K10734 - gmx:100799874 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04301 3 77130166 77134180 Vivi3g04301 3 77130166 77134180 ECH