Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04298 ATGGAAATGGAAGATAACGGGATCTCACGCTCAAAAGTTTATGGATGTTACAATACAAGTGTGTCTAATGGCAACGATATATGGCAAAGTGACAGCGTTTTAACGTTTTATCTTCCGACTTTCGCAGCTCAACTTGCTTTCATGTTGTTCACTAATCGTTGTTTATACTACCTCTTTCGACCCTTCAATCAACCTCGTATTGTTGTCGAGATTTTGGTAGGTTTCATGTTGAGTCCAGAAGTATTTGGGAAAACAGAATTTTTCAAACTTTTGGCTCCTATAAAGTTAGTGGTAACAAATGAAACAATAGCCTACATTGGACTTGTTTACTATGTTTTTCTTGCTGGTTTGGACATGAACTTGGAAACGATCACGAATGCGAGAAAGAAAGCTACGACAATTGCGATTGCAGCTACTGTAGTTCCAATGGTAATGGGAGGTGCAATGTATACTATACTTCAAAGCATGTACATAGGACCTCCTGAGTATTTGTTACATTACAACACACAAAAAGCTTATATGTTTTGGACATTGATCTATAGTGTCACAGGTTTTCCTATTGTGACTCAAATCCTTGCAGATTTGAAACTTCTCTATACAGGTCTTGGTAAAGTTGCTTTAACAGTGGCAATGATTATTGATTTCTATAATTGGGTTCTGTTTGCTTTGTTGCTTCCGTTTGCACTTAACGAAAAGGTTGCGATCTACTCGGTAATAAGTACGGGATCGTTTGTGATTCTTTGTTTCATGGTGATTCAGCCTCATCTCGTTCAGTATGTCGTCCAGAAAACAAATCAGAACGAATGGGACAATTGTCAGCTGTTTTATGTTGTGATGGGAGCTTATTTTTTCGCATTTGTTACTGACTTTCTTGGGACACACCCGGCTGTCGGGGCATTAGTATATGGAATGATGTTGCCGCGCGGTAAATTTACCAATCTGTTGATCGAGAAGACGGAAGATTTCGCTTCTGTTTATCTTGCTCCACTCTTCTTTGCAAGCTGTGGTGTGAGACTTCGAATATTTAGCGTCATCGAAACTCAAGGTTTCGCCGTTGTGGTGATAGTTTTGGTCCTGTCTTGTATCCCTAAGGTTTTGAGCACTGTGATAGCAACTCAGTTATTTGGTATGCCTGTTCATGATGGTGTGGCGATTGGATTGCTTATGAACTCCAAAGGAGTCTTACCTCTAATAATGCTCATTATTGCTTGGGACAAAGAGATATTGAGTGTGGAGTCGTACTCGATTATTATCATGTCTGTTCTTCTAATGACGCTATTGGTACCTGTTATAATCAATGCTATATACAAACCAAGAAAGCTATACAAGCAAAACAAGCTAAGAACAATACAGAATCTAAAGGTTGAAGCAGAAGTTAAAATTTTAGCTTGCGTCCACAACCCTCGTCAAGCCACGGGAATGATCAACATTCTCGAAGCTTCCAATGCCATAAAACAATCTCCGTTACGCATATTTGCTCTTCATTTAGTCGAAATAACGGGAAACACGGCGTCCCTTTTAGCAGCACACATCAACACACAGAGCGGAGTACAAGCCCTCACAGAATCAGAACAAGACTTGGAAAACATAACTCTCACTTTCAAAGACTATGCAGAACAAAATGAAAATATTAAAGTTGATACATTTGCTGCAGTTTCAACCTACTCAACCATTCATGAAGACATACTCAATGTAGCACGAGAAAAACAAGCAACATTGATTCTCCTTCCTTTTCACAAACAATCAAACATAGAAGGTATTCTAGAAACAATGAACGAAGTGTTTAAAGATATAAACCAAAATGTGATGAGAGATGCGCCGTGTTCTGTTGCAATATTCGTTGATCGCGGTCTCGGTTCATTGTTCAAAGTTAATTTACGTCTACTTATGCTTTTCTTTGGCGGTCCGGATGATCGCGAAGCGTTGGCATTAGCATGGAGGATGTCAAAGCATGAAGGAATTCAGTTATCTGTTGTGAGAGTGATTATGTTAGGAGAAGCTGCTCAAGTTGATTCATCGCCACAAGCAGAATCAAAAGAACTATTTTCTGCAGTGATGGATAGTGAAAAGCAAAGAGAGTTTGATGATGAGTATGTGAGTTCTTTTAGACTTAAAGCAGTGAACAATAAAGATTCTATAACTTATTCGGAAAAAGAAGTTCATTCTAGCGAAGATATTCCTCTAGTGTTGGAAGAGTTGGACAAACTTGGATATGATTTGTACATTCTTGGACAAGGGACAGGTAGAAATTCATTGGTGTTGTCGGATTTACTGAAGTGGACTGATTGTCCTGAACTTGGTGTTATAGGGGACATGGTTGCAGCAAATAATTTCGGTTCATGTTCTTCATTGCTTGTTGTACAACAATATGGTTTTGGAGGGATGCTTTTTGAGAATACCACTCAAAATCCTTGTCAGCTGCCTATATATGATTGTGAATCTGGGGATGTTTATGTGAAGGTGGACATATAG 2472 0.3896 MEMEDNGISRSKVYGCYNTSVSNGNDIWQSDSVLTFYLPTFAAQLAFMLFTNRCLYYLFRPFNQPRIVVEILVGFMLSPEVFGKTEFFKLLAPIKLVVTNETIAYIGLVYYVFLAGLDMNLETITNARKKATTIAIAATVVPMVMGGAMYTILQSMYIGPPEYLLHYNTQKAYMFWTLIYSVTGFPIVTQILADLKLLYTGLGKVALTVAMIIDFYNWVLFALLLPFALNEKVAIYSVISTGSFVILCFMVIQPHLVQYVVQKTNQNEWDNCQLFYVVMGAYFFAFVTDFLGTHPAVGALVYGMMLPRGKFTNLLIEKTEDFASVYLAPLFFASCGVRLRIFSVIETQGFAVVVIVLVLSCIPKVLSTVIATQLFGMPVHDGVAIGLLMNSKGVLPLIMLIIAWDKEILSVESYSIIIMSVLLMTLLVPVIINAIYKPRKLYKQNKLRTIQNLKVEAEVKILACVHNPRQATGMINILEASNAIKQSPLRIFALHLVEITGNTASLLAAHINTQSGVQALTESEQDLENITLTFKDYAEQNENIKVDTFAAVSTYSTIHEDILNVAREKQATLILLPFHKQSNIEGILETMNEVFKDINQNVMRDAPCSVAIFVDRGLGSLFKVNLRLLMLFFGGPDDREALALAWRMSKHEGIQLSVVRVIMLGEAAQVDSSPQAESKELFSAVMDSEKQREFDDEYVSSFRLKAVNNKDSITYSEKEVHSSEDIPLVLEELDKLGYDLYILGQGTGRNSLVLSDLLKWTDCPELGVIGDMVAANNFGSCSSLLVVQQYGFGGMLFENTTQNPCQLPIYDCESGDVYVKVDI 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04298 823 Pfam Sodium/hydrogen exchanger family 54 435 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g04298 823 Gene3D - 40 445 IPR038770 -
Vivi3g04298 823 Gene3D - 460 766 - -
Vivi3g04298 823 PANTHER CATION/H + ANTIPORTER 24 790 - -
Vivi3g04298 823 Pfam Universal stress protein family 487 612 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04298 Vivi-Chr3 77081497 77084563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04298 16 818 Antiporter Super Family AT2G13620 36.810 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04298 - - gmx:100802381 1101.27