Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04294 ATGGCTTATTTACTCTTCTTCTTCATCTTCTTCATCTTTCTCTACCTTCTCAGAAAACTCCGTTACGGTAGACTCCGGCTGCCGCCGGGGAGTCTCGGCTTACCGTTCATCGGAGAAACGTTACAGATGATATCAGCCTACAAGACTGATAATCCAGAGCCTTTTCTCGACCAGCGAGTCAGCCGGTATGGTTCAGTCTTCACCAGCCATGTTTTTGGTGAACCGACGGTTTTCTCGACTGATCCGGAAACGAACCGGTTCATTCTCACGAACGAGAAGGTTTTTGAATGTAGCTACCCCGGTTCGATATCGAACCTTCTTGGAAAACACTCGCTGCTTCTCATGAAAGGCTCTCTTCACAAGAAAATGCATTCTCTTACCATGAGTTTTGCTAATTCGTCCATCATTAAAGATCATCTTCTTTGTGATATAGACCGGCTCATCCGGCTCAATATGGATTCTTGGTCCGACCGGGTTCTTCTCATGGAGGAAGCTAAGAAGATAACATTTGAGTTGACAGTGAAACAGTTGATGAGTTTTGATCCAGATGAATGGACAGAGAGTTTAAGGAAAGAGTACATGCTTGTAATTGAAGGCTTTTTCACTATTCCTTTTCCTCTTCTCTCTCCCACCTACCGCAGAGCAATCAAGGCAAGAACCAAGGTGGCAGAGGCACTGACAGTAGTTGTGAGGAATAGGAGAAAAGAGTTTGAGACAGAGAAAGAGAAAAAGAATGACATGCTTGGAGCATTGTTGGCATCAGGTGAACAATTCTCAGACGAGGAAATTGTTGATTTCATGTTGGCTTTGCTTGTAGCTGGATATGAAACTACTTCTACTATAATGACTCTTGCCATCAAGTTTCTCAGTGAGACTCCTTTAGCATTGGCACAGCTCAAGGAAGAGCATGAACAAATCAGAGCAAGGAGTGAGCCAGGGGCAGCACTGGAATGGACAGATTACAAATCAATGGCATTTTCTCAATGTGTTGTGAATGAGACCTTAAGGGTGGCAAACATCATCGGTGCGATATTTAGGAGAACAATAACAGATATCGACATAAAAGGTTACACTATTCCAAAGGGATGGACCGTGATTGCATCGTTTCGTGCTGTGCATTTGAATCTTGAATATTTCAAAGATGCTCGCACCTTCAATCCATGGAGATGGCAGAGTAACAATAACTCAGAAGCTGTAGCAACCCCTGGAAATGTATTTACACCATTTGGAGGAGGACCAAGGTTGTGCCCTGGCTATGAACTTGCCAGAGTTGTTCTTTCTGTCTTCCTTCACCGCTTTGTCACTCGCTTCAGTTGGGTTCCTGCTGAAGAAGATAAGTTGGTGTTTTTCCCAACTACTAGGACACAGAAGAGGTATCCTATTATATTGAAGCGGAGAGAAGAATCAAGATCAAAAATGGGAAATGGGAACACAGAAGAAACAGACAGGAAAAAAGAGAGCTGA 1464 0.4358 MAYLLFFFIFFIFLYLLRKLRYGRLRLPPGSLGLPFIGETLQMISAYKTDNPEPFLDQRVSRYGSVFTSHVFGEPTVFSTDPETNRFILTNEKVFECSYPGSISNLLGKHSLLLMKGSLHKKMHSLTMSFANSSIIKDHLLCDIDRLIRLNMDSWSDRVLLMEEAKKITFELTVKQLMSFDPDEWTESLRKEYMLVIEGFFTIPFPLLSPTYRRAIKARTKVAEALTVVVRNRRKEFETEKEKKNDMLGALLASGEQFSDEEIVDFMLALLVAGYETTSTIMTLAIKFLSETPLALAQLKEEHEQIRARSEPGAALEWTDYKSMAFSQCVVNETLRVANIIGAIFRRTITDIDIKGYTIPKGWTVIASFRAVHLNLEYFKDARTFNPWRWQSNNNSEAVATPGNVFTPFGGGPRLCPGYELARVVLSVFLHRFVTRFSWVPAEEDKLVFFPTTRTQKRYPIILKRREESRSKMGNGNTEETDRKKES 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04294 487 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 Pfam Cytochrome P450 201 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 Gene3D Cytochrome P450 18 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 MobiDBLite consensus disorder prediction 466 487 - -
Vivi3g04294 487 FunFam Cytochrome P450 90A1 17 466 - -
Vivi3g04294 487 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g04294 487 CDD CYP90-like 59 465 - -
Vivi3g04294 487 PANTHER CYTOCHROME P450 26 25 440 - -
Vivi3g04294 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Vivi3g04294 487 SUPERFAMILY Cytochrome P450 20 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04294 Vivi-Chr3 76961919 76966397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04294 115 467 Cytochrome P450 AT5G05690 78.187 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04294 K09588 - gmx:100781291 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04294 3 76961919 76966397 Vivi3g04294 3 76961919 76966397 ECH
Vivi3g04294 3 76961919 76966397 Vivi7g02127 7 83476353 83482695 PCT