Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04293 ATGGCCACCACCACAACCGCCGCCGTCTCGTCACCCTTTTTCGGCACCCGTCTCAGCAAACCAGCCTCCAACATTGGAAGAATCCGCGCCTTTTTCAACATCAACATCAAAAAAGCACTGCCAAAGAAAAAGGAAGTGAAGAAAGTGAGACAACCCGAAAGTGACGGACTAGTTTGGTTTCCCGGCGCGCAGCCGCCGGAATGGTTAGACGGAACCATGATCGGGGATCGTGGTTTTGATCCGTTGGGGTTTGCTAAGCCTGCTGAGTATCTTCAGTTTGACCTTGACTCGCTTGACCAGAATTTAGCTAAGAATCTTGCTGGTGATGTGATCGGGACTAGAGTGGAAGCTTCTGATGTGAAACCGACGCCGTTTCAGCCGTATTCGGAGGTTTTTGGGATTGAGAGGTTTCGTGAGTGTGAACTTATTCATGGAAGGTGGGCCATGCTTGGTGCTCTTGGTGCTTTGGCCGTTGAAGCTTTTACTGGTGTCGCATGGCAAGATGCCGGAAAGGTGGAGCTGGTGGAAGGGTCATCCTACTTTGGATTTTCTCTTCCTTTCTCAATAACCACATTGATATGGATTGAAGTATTAGTAATTGGGTACATTGAGTTTCAAAGGAATGCTGAGCTTGACCCAGAGAAAAGGTTATACCCAGGTGGAAAATTCTTTGATCCTCTTGGTCTGGCCAGTGACCCTGAAGAGAAAGAAAGACTTCAACTGGCAGAGATTAAGCACTCTCGCTTGGCTATGGTGGTCTTTCTTGTCTTTGCAATCCAAGCTGCTGTTACAGGAAAAGGACCTATTGGTTTCGTTGCTACCTTCAACCAGTGA 834 0.4796 MATTTTAAVSSPFFGTRLSKPASNIGRIRAFFNINIKKALPKKKEVKKVRQPESDGLVWFPGAQPPEWLDGTMIGDRGFDPLGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRVEASDVKPTPFQPYSEVFGIERFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGFSLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIKHSRLAMVVFLVFAIQAAVTGKGPIGFVATFNQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04293 277 Gene3D Chlorophyll a/b binding protein domain 56 277 - -
Vivi3g04293 277 Pfam Chlorophyll A-B binding protein 65 261 IPR022796 -
Vivi3g04293 277 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 273 IPR001344 GO:0009765|GO:0016020
Vivi3g04293 277 SUPERFAMILY Chlorophyll a-b binding protein 54 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04293 Vivi-Chr3 76944532 76946454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04293 14 274 Chloroplast and Mitochondria Gene Families AT3G08940 71.756 4.22e-132 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04293 K08915 - gmx:100820335 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04293 3 76944532 76946454 Vivi3g04293 3 76944532 76946454 ECH