Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04280 ATGGCAAAGCCTCTTTCTAAAGATTCTAGTGCAGTCACCATCCTCTCAAAATGCACTGTTTACCCAGACAAGAAATCAACTCTTGGAGACTTGAAACTCTCTGTCTCAGACCTCACCATGATATGTGCTCAATACATCCAAAAAGGCTGCCTCTTCACAACTCCATCTCTTCCCTCTCAAACCCTCATTCCTCACCTTATAACTTCTCTCTCTAAAACCCTCTCTCTCTTCCCTCCACTCGCTGGCCGTTTCTTAACCGACCCCGATGGTTACATCTACATCTCATGCAACGACGCTGGCGTTGATTTCATCCATGCAACCGCCACTCATCTCACTATCACCGACCTTTTGTCACCATCCGATGTCCATGCTGCATTCAAGCAATTCATCCCTTTTCACTGTAAAATCAACTACTCCGCTCATTTCTCACCAATCTTGGCCATTCAGGTCACCTACCTCGCAGACGGAATCTTCATCGGTTTCGCCGTATCTCATGCTGTCACAGACGGTACTACCATCTGGAACTTCTTCAACACGTTCGCCGAGATTTCCAGGGGAGTCACGCAACCTACCAGAATCCCAGACTTCCGCCGGGATTCCATTCTGAATTCAAAAGCCGTCCTCCGTTTGTCGGAGGACGAAATCAACGTGACGTCCAAATCTGACGAGCCTGTGCGTGAGAGAATCTTCAGTTTCACTCGAGAAGCAATTCAGAAGCTAAAAACAAGAGTGAATCGCAACCGTACATCCCCGGCGGAGATTTCATCGTTTCAGTCGCTCTCCGCTCTAATGTGGCAATGTGTTACACGCGCTAGGAAGCTTGAGGGAACTAAAACAACGACGGTTAGAATGGCCGTTAATATTCGTAACCGTCTGGAGCCGAAGTTATCGGAGTATTATTTCGGGAACGCGATTCAGAGCATTGCCACGTATGCATCCGCCGGTGACGTGGTTGATAACGATCTTACATGGTGCGCGGAGCAGTTGAATAAGAATATTAGGGAGTACAATAGTGATGTGGTGAGGCGCGTCGTAGAGGATTGGGAGCGCGAGCCGAAAGCTGTTAAGTTGGGGAATCACGATGGTGGGATAGTGCAGATTGGTAGTTCGCCTAGGTTTCCTATGTATGATAATGATTTTGGATGGGGGAGGCCGGTGGCAGTGAGGAGCGGCGGAGGGAATAAGTTTGATGGCAAGATGTCGGCGTTTCCGGGGAGGGAAGGCGGTAATTCTGTCGACATGGAGGTGGTTTTGGCGACGGAAACGATGGGGATTCTTGAGAATGATCCTGAGTTCTTGCTTTACGCTTCTTGA 1314 0.4886 MAKPLSKDSSAVTILSKCTVYPDKKSTLGDLKLSVSDLTMICAQYIQKGCLFTTPSLPSQTLIPHLITSLSKTLSLFPPLAGRFLTDPDGYIYISCNDAGVDFIHATATHLTITDLLSPSDVHAAFKQFIPFHCKINYSAHFSPILAIQVTYLADGIFIGFAVSHAVTDGTTIWNFFNTFAEISRGVTQPTRIPDFRRDSILNSKAVLRLSEDEINVTSKSDEPVRERIFSFTREAIQKLKTRVNRNRTSPAEISSFQSLSALMWQCVTRARKLEGTKTTTVRMAVNIRNRLEPKLSEYYFGNAIQSIATYASAGDVVDNDLTWCAEQLNKNIREYNSDVVRRVVEDWEREPKAVKLGNHDGGIVQIGSSPRFPMYDNDFGWGRPVAVRSGGGNKFDGKMSAFPGREGGNSVDMEVVLATETMGILENDPEFLLYAS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04280 437 Gene3D - 223 430 IPR023213 -
Vivi3g04280 437 Gene3D - 9 209 IPR023213 -
Vivi3g04280 437 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 14 433 - -
Vivi3g04280 437 Pfam Transferase family 11 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04280 Vivi-Chr3 76504545 76506232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04280 36 428 Monolignol Biosynthesis Gene Families AT5G48930 28.087 3.99e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04280 - - psat:127083931 818.535