Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04250 ATGGCAAAAACAAAACACCTTCCGTCACCCCTCAAAGTACCACCCTCCGCCTCTTCCTCCGAGGAAGATTTTTCCGAAGAAGAAGCTGGGGTACCTCAATCCAAAAACCCTCCACCTCTTGCTTCCAAAAACCCCCAATCAGCTACTTCAAACTCAAACCCTAGACCTCCATCATCTTCTGAATTTGAATCTGGGTCAGATTCTGAATCCGAAACCGAAACCGATTCTGATTCGGAATCGGAACCCACTCCACCTGTGAAACCACTTGCATCGAAGCCGTTGAAGATTCTAACCACTCCTTCACCGGCTAAAGCTGGAACCAAGCGTGCTATCGAGTTTCAAACCACTGGAACCAAGCGTGCGGCTGATAACAACGGCACTGACTCTGACTCTTCTAAGTGTTTGAAGAAGAAAGCAAAAAAAACTGAACGTCGTGGTTCCGGTGACGAGAAGGAAGCGGCGAGAGACTCTATCAAAAAGATGTCAGCTCAGAGACTATTCAGCGAGGAAGACGAACTCGCCATTATGAAATGTATAGCTGATTTCATTTCAACTAAAAAGGATCCTTGGAAAAACACACAAGCATTTTACAATTTTGTGAAGAACTCTATTCGAGCTTGCGCAAACAAAGGTCAACTTAGGCGTAAGGTTCTTGCTCTGAAGAAAAAGTTTGAAAGAAATGATGAAAATTTCACCAAAGAACATGATCAGAAAGCTTTTGAACTTTTAAAGAAGATTGAGTTTAAAAAACAGAGAACACCGAAAAAAGGGCTTGGGTTCGGATTCTGTTTTGCAAAAGAAGTATTAGTTGCAAAGAAGAAAGATACTGTGAAAAATGTTAAAAATAGTTTGGCTTTTAAGGAAATGTCTAGGTTTGGTGATGGTGTGGGGTTGTCTTTGGATGCTATGGAAAAGGGAATGGAATTGATGGGAGAATCAAAAAATGCTATGTTAGAAGAAAAATGGAAGAAGGTTCGGATTGTTGAGATGAAGTTGTTTATGACTCGAGCTGGTTAG 1017 0.4159 MAKTKHLPSPLKVPPSASSSEEDFSEEEAGVPQSKNPPPLASKNPQSATSNSNPRPPSSSEFESGSDSESETETDSDSESEPTPPVKPLASKPLKILTTPSPAKAGTKRAIEFQTTGTKRAADNNGTDSDSSKCLKKKAKKTERRGSGDEKEAARDSIKKMSAQRLFSEEDELAIMKCIADFISTKKDPWKNTQAFYNFVKNSIRACANKGQLRRKVLALKKKFERNDENFTKEHDQKAFELLKKIEFKKQRTPKKGLGFGFCFAKEVLVAKKKDTVKNVKNSLAFKEMSRFGDGVGLSLDAMEKGMELMGESKNAMLEEKWKKVRIVEMKLFMTRAG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04250 338 MobiDBLite consensus disorder prediction 1 157 - -
Vivi3g04250 338 MobiDBLite consensus disorder prediction 130 157 - -
Vivi3g04250 338 Pfam Protein of unknown function, DUF573 164 246 IPR007592 GO:0006355
Vivi3g04250 338 MobiDBLite consensus disorder prediction 111 129 - -
Vivi3g04250 338 PANTHER BNAANNG10740D PROTEIN-RELATED 55 336 IPR007592 GO:0006355
Vivi3g04250 338 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04250 Vivi-Chr3 75734011 75735027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04250 4 246 GeBP Transcription Factor Family AT1G61730 35.632 4.28e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi3g04250 DUF573 9.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04250 - - vvo:131658367 451.44