Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04249 ATGGCAAAAACAAAACACCTTCCGTCACCCCTCAAAGTACCACCCTCCGCCTCTTCCTCCGAGGAAGATTCTTCCGAAGAAGAAGCTGGGGTACCTCAATCCAAAAACCTTCCTCCTCTTGCTTCCAAAAACCCTCCATCAGCTACTTCAAACTCAAACCCTAAACCTCCATCATCTTCTAAATTTGAATCTGGGTTAGATTCTGAATCCGAAACCGAAACCGATTCTTATTTGGAATCGGAACCCACTCCACCTGTGAAACCACTTGCATCGAAGCCGTTGAAGATTCTAACCACTCCTTCACCGGCTAAAGCTGGAACCAAGCGTGCTATCGAGTTTCAAACCACTGGAGCCAAGCGTGCGGCTGATAACAACGGCACTGACTCTGACTCTTCTAAGCGTTTGAAGAAGAAAGCAAAAAAAACTGAACGTCGTGGTTCCAGTGACGAGAAGGAAGCGACGAGAGACTCTATCAAAAAGATGTCAGCTCAGAGACTATTCAGCGAGGAAGACAAACTTGCCATTATGAAATGTATAGCTGATTTCATTTCAACTAAAAAGGATCCTTTTAAAAACACACAAGCATTTTACAATTTTGTGAAGAACTCTATTCGAGCTGACGCAAACAAAGGTCAACTTAGGCGTAAGGTTCTTGCTCTGAAGAAAAAGTTTGAAAGAAATGATGAAAATTTCACCAAAGAACATGATCAGAAAGCTTTTGAACTTTTAAAGAAGATTGAGTTTAAAAAACAGAGAACACCGAAAAAGGGCTTGGGTTCGGATTCTATTTTTGCAAAAGAAGTATTAGTTGCAAAGAAGAAAGATACTGTGAAAAATGTTAAAAACAGTTTGGCTTTTAAGGAAATGTCTAGGTTTGGTGATGGTGTGGGGTTGTCTTTGGATGCTATGGAAAAGGGAATGGAATTGATGGGAGAATCAAAAAATGCTATGTTAGAAGAAAAATGGAAGAAGGTTCGGATTGTTGAGATGAAGTTGTTTATGACTCGAGCTGGTTAG 1017 0.4071 MAKTKHLPSPLKVPPSASSSEEDSSEEEAGVPQSKNLPPLASKNPPSATSNSNPKPPSSSKFESGLDSESETETDSYLESEPTPPVKPLASKPLKILTTPSPAKAGTKRAIEFQTTGAKRAADNNGTDSDSSKRLKKKAKKTERRGSSDEKEATRDSIKKMSAQRLFSEEDKLAIMKCIADFISTKKDPFKNTQAFYNFVKNSIRADANKGQLRRKVLALKKKFERNDENFTKEHDQKAFELLKKIEFKKQRTPKKGLGSDSIFAKEVLVAKKKDTVKNVKNSLAFKEMSRFGDGVGLSLDAMEKGMELMGESKNAMLEEKWKKVRIVEMKLFMTRAG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04249 338 PANTHER BNAANNG10740D PROTEIN-RELATED 42 336 IPR007592 GO:0006355
Vivi3g04249 338 MobiDBLite consensus disorder prediction 1 159 - -
Vivi3g04249 338 MobiDBLite consensus disorder prediction 126 159 - -
Vivi3g04249 338 MobiDBLite consensus disorder prediction 37 65 - -
Vivi3g04249 338 Pfam Protein of unknown function, DUF573 164 246 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04249 Vivi-Chr3 75729242 75730258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04249 4 246 GeBP Transcription Factor Family AT1G61730 31.274 3.78e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi3g04249 DUF573 2.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04249 - - vvo:131658367 479.174