Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04189 ATGGCTGGAATGTGCTGTGGTGTTGTTGGAGAAGGTGACTCTCCGGCGAGTTCACGTTCTTCTCGACGCCGGAATTTAGACATGCTACCGTTCAAATACATCGCTGACATGGCTGTTTCCTCTTCCGGAACTTCACGGAAACGCCGTCAAGCGGATCTATCTGGTAAGAGTGATTTCGAAAGCTGTGAAGACTCAAACGGTGACTGCGGAAACGAGAAAAGTAAGAAGAACAAGAACGAATCCACCCAAGTTTCTGAAAACAAACCTTCAACAGAAGGTAATTCGGAAGACGCAGAGTTTCCGAAGTTTGGAGTTACTTCAGTTTGCGGTAGAAGAAGAGACATGGAAGATTCCGTTTCCGTTCAAACTTCTTTCTCTGAAGAACTGTTTCACTTCTTCGGCGTTTTCGACGGTCACGGCTGCTCTCATGTTGCGACCATGTGTAAGGAGAGACTCCATGAGATTGTGAAAGAACAGATCAACCAATCGCAAGAGAATTTCGAGTGGAATAGCGCTATGCAACAAGGCTTTGCTCGCATGGACGACGAAGTTCAGAGATGGAGCAGCAGCAGCCAGACTTTTAGTTGTAGGTGCGAGCTTCAAACTCCTCACTGCGACGCCGTTGGATCTACTGCCGTGGTTGCTGTTGTCACTCCTGACAAAATCGTCGTCTCAAACTGCGGCGATTCTCGCGCTGTTCTCTGCCGTGGTGGCGTCGCCATCCCTCTCTCCTCCGATCACAAGCCGGATCGACCTGATGAGTTGCTCCGAGTCGAAGCTGCAGGAGGGCGCGTGATATTCTGGGATGGTCCAAGAGTGCTTGGTGTACTTGCCATGTCTAGAGCTATAGGCGACAATTATCTGAAGCCGTATGTGATATCTGAACCTGAAGTAACGGTAACGGAGAGAAGAGTTGAAGACGAGTGTTTGATACTGGCCAGTGATGGACTATGGGATGTTGTTTCAAACGAAACCGCATGCGGTGTGGTGAAGATGTGTTTGAAGTCGCATAAGATGCCGTCTCCGCCGGGGTCTCCGGCTAACGAAGAAGTGACTACTGATGGTTCTGATCGTGCATGTTCTGATGCGTCCATTCTGTTGACCAAGTTGGCTTTGGCAAGACACAGTTCGGATAATGTTAGCGTGGTGGTGATTGATTTGAGGAGGGATCAACGTGCATCATCAAATTCCAACAATTAA 1200 0.4883 MAGMCCGVVGEGDSPASSRSSRRRNLDMLPFKYIADMAVSSSGTSRKRRQADLSGKSDFESCEDSNGDCGNEKSKKNKNESTQVSENKPSTEGNSEDAEFPKFGVTSVCGRRRDMEDSVSVQTSFSEELFHFFGVFDGHGCSHVATMCKERLHEIVKEQINQSQENFEWNSAMQQGFARMDDEVQRWSSSSQTFSCRCELQTPHCDAVGSTAVVAVVTPDKIVVSNCGDSRAVLCRGGVAIPLSSDHKPDRPDELLRVEAAGGRVIFWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERRVEDECLILASDGLWDVVSNETACGVVKMCLKSHKMPSPPGSPANEEVTTDGSDRACSDASILLTKLALARHSSDNVSVVVIDLRRDQRASSNSNN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04189 399 Gene3D - 97 396 IPR036457 -
Vivi3g04189 399 SUPERFAMILY PP2C-like 102 388 IPR036457 -
Vivi3g04189 399 FunFam Protein phosphatase 2C 37 97 394 - -
Vivi3g04189 399 SMART PP2C_SIG_2 116 387 IPR001932 -
Vivi3g04189 399 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169
Vivi3g04189 399 MobiDBLite consensus disorder prediction 49 82 - -
Vivi3g04189 399 SMART PP2C_4 92 385 IPR001932 -
Vivi3g04189 399 Pfam Protein phosphatase 2C 103 362 IPR001932 -
Vivi3g04189 399 PANTHER PROTEIN PHOSPHATASE 77 387 IPR015655 GO:0004722|GO:0006470
Vivi3g04189 399 CDD PP2Cc 102 387 IPR001932 -
Vivi3g04189 399 MobiDBLite consensus disorder prediction 1 25 - -
Vivi3g04189 399 ProSiteProfiles PPM-type phosphatase domain profile. 102 387 IPR001932 -
Vivi3g04189 399 MobiDBLite consensus disorder prediction 39 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04189 Vivi-Chr3 73772573 73774537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04189 1 395 PP2C-type Phosphatase Gene Family AT3G11410 57.619 5.94e-139 400