Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04166 ATGCTTCAATTTCAAACCATCATCTTCAACTCTGTCATGGCAAAAACACCACTGTTTCTTCTCTGCATATTGACCCTTCTAGCCTCAAATTCCATACAATCTTACTCGCAGCAAGATGAGTTTTTCTTTGAAGGATTCAATGAAGCTACCACCAACATAACCTTAAACGGAGGTGCAGTGATTGAACACAAGGGCACACTTCGTTTAACAAACGACACTGAAAGAGTAATAGGCCATGCTTTTTATTCAACCCCAATTAACTTCAAAAACAAAACCAAAGTTTTCTCCTTTTCAACTTCTTTTGCTTTTGCAATAGTCCCTCAATATCCAAAACTTGGAGGCCATGGCTTCGCTTTCACCGTTTCTCCTACCAATAAACCCTCCAATGGCTATCCAAGTCAGTACTTAGGCCTTCTCAACCCAAAAGATCTAGGCAACTTCTCAAACCACCTATTCGCAGTTGAATTCGACACAGTACAAGATTTCGAATTCAACGACATCAATGACAACCATGTTGGTATCAACCTGAACAACATGGTATCAAACAAATCAGTCAAAGCATGTTTTTTTACAGATGAGTCAACGAATAAACAAGTTCAAGACCTCAATTTGAAGAGCGGTAGTATAATTCAAGCATGGATCGACTATGATTCCTCAATGAATCATCTTGAAGTTAGACTCTCTCCATTTTCATCAAAACCCACTTCACCAATCTTATCATACCAAGTAGATCAAACACCAATCTTCAAAGAAACTATGTATGTTGGGTTTTCTTCTTCAACAGGGTTACTCTCTAGCTCACACTATATATTAGGTTGGAGCTTCAAAATCAATGGAGAATCCAAAACACTATCATTGAACAATCTTCCTTCACTCTCTTCACATTCGAATCAATCTACTCAAACTCGAAAAGCCACAATCTTGGGTCTATCTATCTCATTTGTGACTCTAATAGTTATAACAATTGGTTTATCTTTATACTTCAAGATGAAAAACGATGATGTTATAGAATCATGGGAACTCGAAGTGGGTCCACATAGATTCCCTTACAAGGAACTGAACCAAGCAACAGGAGGGTTCAAGGACAAGAACCTTATCGGGCTCGGAGGTTTCGGTCGAGTTTACAAAGGGGTGTTAGTGTCACCAAATTCCAAAACAGAAATCGCTGTCAAACAAATCTCCCATGAATCAAAACAAGGGTTACAAGAGTTTATCTCAGAGATCGAAACCATAGGTAAACTCCGACATAGGAACCTAGTAGAGTTACTAGGTTGGTGTCGGAAGGGAAATGATTTGATTTTGGTTTATGATTTCATGAAAAACGGGAGTTTGGATAAGTACATATTTGAACAACCGAGAGAAGTGTTGAAATGGGAAGAGAGGTTTAGGATCGTAAAGGGTGTGGCTTTGGGGTTGGTTTATCTGCATGAGGAATGTGAACAGACGGTGATTCATAGAGATGTGAAAGCTGGGAATGTGCTTTTGGATAGTGAGATGAATGCGAGGTTGGGTGATTTTGGGTTGGCGAAGCTTTATGATCGCGGTGAGAATCCGAATACGACGAGAGTGGTTGGGACGTTGGGGTATATGGCGCCGGAGTTAACGAGGACAGGGAAGCCGACGAGGAGTTCTGATGTGTTTGCGTTTGGGGCGGTGTTGTTGGAGGTGGTGTGTGGGAGAAGGCCGATTGAGGCGAAAGCGTTGCCGGAGGAGTTGGTTTTGGTGGATTGGGTTTGGGATAGGTGGAGGTTGGGGGTGGTGGGGGAGGTTGTGGATGGGAAGATGGGTGGGGTTTATGATGAGGGGGAGGTTTTGTTGGTGGTGAAGGTGGGTTTGATGTGTTCTGATGAGGTGCCGGAGAGGAGGCCGACGATGAGGCAGGTGGTTGGGTATTTAGAGAGGGAGGTGGAGTTGCCGGAGCTGGATGGTTTTGGGGTGAAAAAGAGGGATTTTTTGTATTCGACGTCGTTGGGTTTTGGAAGTGTGAATACTTGGTCGTCGGTCGGTGATGACGTGGACGGTGGGTATGTTTCGTCTTTTACACTTTCCGGTGGCCGGTAG 2061 0.4318 MLQFQTIIFNSVMAKTPLFLLCILTLLASNSIQSYSQQDEFFFEGFNEATTNITLNGGAVIEHKGTLRLTNDTERVIGHAFYSTPINFKNKTKVFSFSTSFAFAIVPQYPKLGGHGFAFTVSPTNKPSNGYPSQYLGLLNPKDLGNFSNHLFAVEFDTVQDFEFNDINDNHVGINLNNMVSNKSVKACFFTDESTNKQVQDLNLKSGSIIQAWIDYDSSMNHLEVRLSPFSSKPTSPILSYQVDQTPIFKETMYVGFSSSTGLLSSSHYILGWSFKINGESKTLSLNNLPSLSSHSNQSTQTRKATILGLSISFVTLIVITIGLSLYFKMKNDDVIESWELEVGPHRFPYKELNQATGGFKDKNLIGLGGFGRVYKGVLVSPNSKTEIAVKQISHESKQGLQEFISEIETIGKLRHRNLVELLGWCRKGNDLILVYDFMKNGSLDKYIFEQPREVLKWEERFRIVKGVALGLVYLHEECEQTVIHRDVKAGNVLLDSEMNARLGDFGLAKLYDRGENPNTTRVVGTLGYMAPELTRTGKPTRSSDVFAFGAVLLEVVCGRRPIEAKALPEELVLVDWVWDRWRLGVVGEVVDGKMGGVYDEGEVLLVVKVGLMCSDEVPERRPTMRQVVGYLEREVELPELDGFGVKKRDFLYSTSLGFGSVNTWSSVGDDVDGGYVSSFTLSGGR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04166 686 Gene3D Transferase(Phosphotransferase) domain 1 439 646 - -
Vivi3g04166 686 CDD lectin_legume_LecRK_Arcelin_ConA 40 279 IPR001220 GO:0030246
Vivi3g04166 686 ProSiteProfiles Protein kinase domain profile. 360 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04166 686 Gene3D - 38 278 - -
Vivi3g04166 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Vivi3g04166 686 ProSitePatterns Protein kinases ATP-binding region signature. 366 391 IPR017441 GO:0005524
Vivi3g04166 686 FunFam L-type lectin-domain containing receptor kinase S.4 37 283 - -
Vivi3g04166 686 SUPERFAMILY Protein kinase-like (PK-like) 335 632 IPR011009 -
Vivi3g04166 686 FunFam receptor-like protein kinase FERONIA 328 438 - -
Vivi3g04166 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 292 IPR013320 -
Vivi3g04166 686 FunFam L-type lectin-domain containing receptor kinase S.4 439 643 - -
Vivi3g04166 686 CDD STKc_IRAK 366 634 - -
Vivi3g04166 686 SMART serkin_6 360 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04166 686 PANTHER - 52 636 - -
Vivi3g04166 686 Pfam Protein kinase domain 360 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04166 686 Pfam Legume lectin domain 39 289 IPR001220 GO:0030246
Vivi3g04166 686 Gene3D Phosphorylase Kinase; domain 1 345 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04166 Vivi-Chr3 73237943 73240423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04166 40 652 Receptor kinase-like Gene Family AT3G55550 58.643 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi3g04166 Lectin_legB 2.4e-73 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04166 - - gmx:100787552 886.33