Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04157 ATGAGTTTTGTTTTTCGAGGTGCAAGAGGTGATATAGAAAATGGGTTTCCAGGATTTATACCCGAGAGGCGTGCATTGCGTGTTCATGCAGCACGACCTAGTAATTCCAACTCACTCACTTTTCTCGTAACAGTTCTCCTGTTATTCATGATACTGAACTCCCACCAGATGTCACCAAATTTTCTGCTCTGGCTAGTGCTTGGTGTTTTTTTGATGGCTACAATGCTAAGGATGTATGCAACATGTCAACAGCTTCAAGCCCAGGCCCAAGCTCATGCAGCAGCAGCCAGTGGTCTTCTTGGCCACACAGAACTGCGGTTGCATATGCCTCCATCGATAGCACTTGCAAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTGGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCAGATAATGTTTCTACTGCACCTTCTATGACTGAAGAAGAGATAAACGCTCTTCCAGTTCACAAATACAAGGTTTCTGTTCCCCAAAAAAGTAGCTCCTCAATGCAACAAGCACCCCCATCCACTTCTGCTGAGAACAATATGGCAGCATCTTCCTCAACACCAAATTCTTCTACGTCGGTTGCTTCGTGTGCTGCAATATTCAAACCAACCAATAGTAAAGACATAGGATGGAAATATAATGGTTTGAAGGATTTGAATAATCGGAAGAAGGTCACATGTGATTTCTGTAACATGACAAGTAGTGGAGGAATAAGTAGAGCAAAAAGGCATCAAGCAGGAATTCAAGGCGATGTAATTCCTTGTTTGAAAACACCGGAGGATGTTAAGGCTATATTACGTGCCGACATTTTTGAGAAAGAGAAAATTAAGAAAGGAATACAAGAAATTGCGGTGCAAATAGATGCGGATGATACCCTTGATATCGAGGAAATAAGTAGGATTAGAACCGGAAAGAGGATTGCCGAGAATGAGACCTCTTCAATAGCCATCAAGAGGACTAAAGGGCCATTAGATTTGGTGTATAAGAAGGCTAAGGACACAAGTATCAATGATGCTTGTGATAAAGAAGCGAGGGCAAGAACTATCCAATATGTTGCTCGCTTTTTTTATACGTGTGGAGTTGCTTTTAATGTAGCAAATGCAAGAGCTTTTAAGTTGATGTTGGAAGCCGTTGGGAGCTATGGTCCTCATTTGAAGCCGCCAAGTTATCATGAACTTAGGGTTCCACTTCTTAAAAATGAGTTGGAATATACGAAAGGTTTGTTGAAGAACCAAGAGGTGCAAAGAAACAAATACGGTTGTTCAATTATGTCGGATGGTTGGACGGATAGAAAAGGTAGAACATTGATCAATTTCTTGGTCAATTGCTCGACGGGGACCATGTTTGTGAAGAGTGTGGATGCTTCCGACTATGCAAAGACGGGTGAAAAGCTAGCCGAGTTGTTGGACACATTTGTTGAGGAAATGGGTGAAAAAAATGTTGTCCAATTGATCACCGATAATGGAAGCAACTATGTAGCGGCGGGTAAAATATTGTGTGAAGGGAGGAAACACTTGTTTTGGACTCCATGTGCTGCCCATTGTATAGACCTTATGTTAGAAGACATAGGCAAAATTCCAAAGGTGAAAAATGTTATACAAAAAGGGATTAAGGTTGTGGGCTACATTTATAACCATACTTTTGCTTTGAATTTAATGAGAAAGACTACCGGCAATGTTGAATTGGTTAAACAAGGAGTGACAAGGTTTGCTACCCATTTCCTTTGTCTACAAAGAATGCAAGAACTAAGAGGAAAGCTTAGAGAGATGTTCCTTTGTGAAGAATGGACAAGTTCCAAGTGTGCCAAAGATCCTAAAGGAAAAAGGGCAGCTACTACTATTCTTAATGTATCATTTTGGAGTGATGTTCTCTACACTCTTAAGTGCATGGCGCCTCTTGTAGATGTGTTAAGAATGGTTGACAATGAAAGGAAACCCGCAATGGGATACATATATGCCGCAATGGGGGTAGCGAAGGAATCGATTGAAAAAGCTTTCAATTTAAATTCAAGCAAGTATAAAGATGTTTTTGAAATCATTGATAAAAGATGGGAGTGTCAACTTCATCATCCGCTACATGCTGCAGGCCACTATCTCAATCCTGAATATTATTTTTCTAAACCAGAAATTGAGTCCGATGCTAGATTGGTAAAAGGCCTCCGTAGGTGCATTGAGAGACTTAGTGAAAGTGAAGATGTGGAGGATTTGATTTCAGTAGAATTGGCACAATATCGGAGTGCTTCAGGTCTCTTTGGTATAAAAGCGGCAATGAGACAAAGGTCGACATTAGCTCCAGCTGAGTGGTGGAAGTCTTATGGAGCCGAAACTCCGCATTTGCAATTGTTGGCTATTAAAGTGTTGAGTTTGGGTTGCAGTGCTTCCGGATGTGAGCGTAACTGGAGCATCTTTGAGCATATTCATTCCAAGAAGAGAAATAAATTGGAACATCAAAAATTGCAAGACTTGGTGTTTATCAAGTATAATCAAGCTTTGGTAGAGAGGTTTGAAATTCGAGATAAAATTGATCCTATGGAATTTAGCGAAATTAATTTCCACACCGAATGGTTGGTGGGAGAGATGGAAAAGGTAGGAGATGTTGGTGAAGAATTGGTTGATCCAAATCATGATTTAACTTGGACTCAAGTTGCCGATGCTAGTGGGGCTAATGAGCCTTTAATCTACACTAGGAGGTCAATGGCACGCCCACAAACATCAAGGCCACCAAGAGCAACAATTGCACCAAGAGCAACAATTGCACCAAGAGCAACAATTGCACAACAAGTGGTGGTAGAAGAGGTTGAAGAAGATGTTGAAGATGAAGAATCGGAGGAAGATGTTGAAGAAGATGAAGAATTGGAGGAAAATGTTGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGATGTTGAGGAATATTTTGATGATGCTACATGA 2979 0.4095 MSFVFRGARGDIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSVPQKSSSSMQQAPPSTSAENNMAASSSTPNSSTSVASCAAIFKPTNSKDIGWKYNGLKDLNNRKKVTCDFCNMTSSGGISRAKRHQAGIQGDVIPCLKTPEDVKAILRADIFEKEKIKKGIQEIAVQIDADDTLDIEEISRIRTGKRIAENETSSIAIKRTKGPLDLVYKKAKDTSINDACDKEARARTIQYVARFFYTCGVAFNVANARAFKLMLEAVGSYGPHLKPPSYHELRVPLLKNELEYTKGLLKNQEVQRNKYGCSIMSDGWTDRKGRTLINFLVNCSTGTMFVKSVDASDYAKTGEKLAELLDTFVEEMGEKNVVQLITDNGSNYVAAGKILCEGRKHLFWTPCAAHCIDLMLEDIGKIPKVKNVIQKGIKVVGYIYNHTFALNLMRKTTGNVELVKQGVTRFATHFLCLQRMQELRGKLREMFLCEEWTSSKCAKDPKGKRAATTILNVSFWSDVLYTLKCMAPLVDVLRMVDNERKPAMGYIYAAMGVAKESIEKAFNLNSSKYKDVFEIIDKRWECQLHHPLHAAGHYLNPEYYFSKPEIESDARLVKGLRRCIERLSESEDVEDLISVELAQYRSASGLFGIKAAMRQRSTLAPAEWWKSYGAETPHLQLLAIKVLSLGCSASGCERNWSIFEHIHSKKRNKLEHQKLQDLVFIKYNQALVERFEIRDKIDPMEFSEINFHTEWLVGEMEKVGDVGEELVDPNHDLTWTQVADASGANEPLIYTRRSMARPQTSRPPRATIAPRATIAPRATIAQQVVVEEVEEDVEDEESEEDVEEDEELEENVEEEEEEEEDEDEDVEEYFDDAT 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04157 992 Coils Coil 944 990 - -
Vivi3g04157 992 MobiDBLite consensus disorder prediction 173 206 - -
Vivi3g04157 992 Pfam hAT family C-terminal dimerisation region 755 842 IPR008906 GO:0046983
Vivi3g04157 992 PANTHER OSJNBA0013A04.12 PROTEIN 235 845 - -
Vivi3g04157 992 Pfam Protein of unknown function (DUF 659) 402 550 IPR007021 -
Vivi3g04157 992 MobiDBLite consensus disorder prediction 945 992 - -
Vivi3g04157 992 MobiDBLite consensus disorder prediction 942 992 - -
Vivi3g04157 992 SUPERFAMILY Ribonuclease H-like 433 845 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04157 Vivi-Chr3 72949677 72956489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04157 1 251 C3H Transcription Factor Family AT3G55530 65.251 4.36e-95 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04157 - - vvo:131661867 1795.02