LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi3g04146	ATGGCAGAACTTCTTTTTGAGACTTATGGAGTTCCATCTATAGCTTTTGGTGTTGATGCTTCATTCAGCTATAAGTATAACCAACAACGAAGGGTTTGTGATAAAGATGGTCTTGCTATGTGTCCTGGATTTGCTACAACCCATGTGATTCCGTTTGTTGACGGGGAGCCAATTTATAAAGGAAGCTGTCGTACTAATATTGGTGGATTCCATGTGACTGATTATTTAAAGCAACTTCTTTCACTTAAATATCCTTATCATTTGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTATGTTGCACCGGACTATGTTTCTGAAGCTCGATTGTTTCAGAAAGGAGCGAAGGAGGCTGAAGAAAAAACCAAAATGTGGCAGCTCCCATGGGTGCCACCACCAGTTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAAACAAGGTCAAAGGTTGCGGGAAATGGCTGAGGCAAAGAGGTCATCAAAAATAAATGAGCTGGAAAACGAATTACGTGGTTTGGAATTTCTTTTGAATCAACTTGGACATGTTCAAGAGAGTGATGTACCATCATTCTTAGCAGAGACTGGCTATGTCTCTAGGCAGGAAGTAGAATCTGCCCGTAATAAAAATATGCAATCCTTACGGAAAGCAAAAGGTGAACAAAAGAGCGAACAAGATGAATTTGAAAAAACTGACCCTAATGAGAAGTATACTCTTATAAACGTCCCTGATGACATGCTGACCGCAGATCAGCTTTTGGAAAAGAGGAAACAGTTGTCAATCAAATCTATGTCTGATGGGAGGCAGCGATTAAAACTGAAGCGCCAAGAAGAGGAGCTGGAAAGAGGAAGGAAACAACAGCTAGAGGAGGAGAGACGCTTGGCAAATCCAGAGCTTTACGTGGAACAATTGCGTGCCAGTTACAACGACCTTTCAGAGAAACTTAATCAACGTAAACGGCTCAAGACAAATGGAGGTTCCTCCACAAATGGAAATGGTTTGGCAGGTAGCGTTGGCCGTGGTGAGAGACTCAATGCTGCTCAAAGGGAGAGAATGCGCCTGCTGACAACTGCTGCCTTTGATCGTGGAAAAGGCGAGGATACATTTGGTGCCAAAGACGAAGATTGGCAACTTTACAAGTTGATGAGCAAAGATAATGACGACGACGATGAGGAACCAGATGAGGATAGCGTAGAGCTAGCCCGCATCTCTTCGAGGCTCCAGGAGTTGGATCCAACATTTGCGCCCAAGGTAGAGACAAGTAGCTCCCAACCTGCCGAGGTGCCACGTGTCCGTCCACTCACAAAAGAAGATTTTCAGATTGTTTTCGGGATTGAAAGGTTCAGGTGTCCTGAAATTTTGTTCAGTCCAAACTGGATTGGAGTTGATCAAGTTGGATTAGATGAGATGGCTGGGGTCTCAATGAGAAGGTTATCATGTAACGACGAAAGACTTGAAGAGAGAATGACTAATTCCATACTTGTGACAGGTGGAAGTTCTCTTTTCCCCGGCATCGTTGAGCGCCTTGAAGCTGGAATTCGGATGATCAGACCCTGTGGTTCGCCTATAAAAATAGTTAGAGCACTTGATCCGGTTATGGATGCATGGCGTGGTGCATCTGCTTATGCATCAACCCCAGGTTTCCGCACACAAACATTCACTAGGAAGGATTATTATGAAAAAGGTGAAGATTGGCTTCGTAATTATCAACTTAAATATTCATTGTGA	1764	0.4354	MAELLFETYGVPSIAFGVDASFSYKYNQQRRVCDKDGLAMCPGFATTHVIPFVDGEPIYKGSCRTNIGGFHVTDYLKQLLSLKYPYHLARFTWEKVEDLKMEHCYVAPDYVSEARLFQKGAKEAEEKTKMWQLPWVPPPVEEPPSEEEIARKAAIKEKQGQRLREMAEAKRSSKINELENELRGLEFLLNQLGHVQESDVPSFLAETGYVSRQEVESARNKNMQSLRKAKGEQKSEQDEFEKTDPNEKYTLINVPDDMLTADQLLEKRKQLSIKSMSDGRQRLKLKRQEEELERGRKQQLEEERRLANPELYVEQLRASYNDLSEKLNQRKRLKTNGGSSTNGNGLAGSVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSKDNDDDDEEPDEDSVELARISSRLQELDPTFAPKVETSSSQPAEVPRVRPLTKEDFQIVFGIERFRCPEILFSPNWIGVDQVGLDEMAGVSMRRLSCNDERLEERMTNSILVTGGSSLFPGIVERLEAGIRMIRPCGSPIKIVRALDPVMDAWRGASAYASTPGFRTQTFTRKDYYEKGEDWLRNYQLKYSL	587

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vivi3g04146	587	Gene3D	-	1	16	-	-
Vivi3g04146	587	SUPERFAMILY	Actin-like ATPase domain	36	580	IPR043129	-
Vivi3g04146	587	Gene3D	Actin; Chain A, domain 4	382	476	-	-
Vivi3g04146	587	MobiDBLite	consensus disorder prediction	272	302	-	-
Vivi3g04146	587	SMART	actin_3	28	584	IPR004000	-
Vivi3g04146	587	Coils	Coil	175	195	-	-
Vivi3g04146	587	Gene3D	Actin; Chain A, domain 4	73	126	-	-
Vivi3g04146	587	Gene3D	-	18	72	-	-
Vivi3g04146	587	FunFam	Putative actin-related protein 5	547	575	-	-
Vivi3g04146	587	MobiDBLite	consensus disorder prediction	333	347	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi3g04146	Vivi-Chr3	72769432	72774988	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi3g04146	453	574	Cytoskeleton Gene Families	AT5G09810	34.426	1.55e-16	79.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi3g04146	K11672		-	gmx:100808396	936.791

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi3g04146	3	72769432	72774988	Vivi3g04146	3	72769432	72774988	ECH

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