Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04114 ATGAGCTTAACAAGGAGAATTTGCAGCTTGCATGTGAGGAGGCTTTCTTCCTGTGAGACAATGGGATCAACCACAACTATTTGCAGCGATAAGACCGGAACATTGACAATGAATCAGGTGAGTGTTGTTGAGGCATGTGTTGGTGGGAAGAAGATTATATCTCCTAACGATAAATCACAGTTATCTACTATCGTCTATTCTTTGCTGATTGAATGTGCTGCACAGAACACTAATGGAAGTTTTTTTGTACCGGAGAGTGACAATGGTGTTGAGGTTTCTGGGATGACTCTAAAGAAGCGGATTCGCTACCAAGCAAAGAATAAACTATGA 330 0.4121 MSLTRRICSLHVRRLSSCETMGSTTTICSDKTGTLTMNQVSVVEACVGGKKIISPNDKSQLSTIVYSLLIECAAQNTNGSFFVPESDNGVEVSGMTLKKRIRYQAKNKL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04114 109 Gene3D - 12 24 - -
Vivi3g04114 109 Gene3D - 38 51 IPR023299 GO:0000166
Vivi3g04114 109 SUPERFAMILY HAD-like 16 51 IPR036412 -
Vivi3g04114 109 PANTHER CATION TRANSPORTING ATPASE 11 101 - -
Vivi3g04114 109 ProSitePatterns E1-E2 ATPases phosphorylation site. 30 36 IPR018303 -
Vivi3g04114 109 Gene3D - 25 37 IPR023214 -
Vivi3g04114 109 FunFam Phospholipid-transporting ATPase IC 25 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04114 Vivi-Chr3 72164700 72167218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04114 12 101 Primary Pumps ATPases AT5G57110 57.778 1.01e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04114 K01537 - vvo:131656086 216.853