Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04113 ATGGTCAAAACAAAAACATTCATCTCCCTCTTGTTCTTCTCAATCTTCATTCTCCATTCTCTTTCCTTCTCCACAGACACATTCATCTACGGCGGTTGCACACAACAAACATTCACCTCAACCTCCCCTTACGAGTTCAACCTCAACTCCCTCCTCACTTCCCTAGTCAACTCAGCAACCTACACATCCTACAACAACTTCACAATCGTCGCTTCAAATCCCAACGACATCGCTTACGGTCTCTACCAATGCCGCGGCGACCTCTCCATGCCAGACTGCGCCTCCTGCGTCTCACGCGCTGTCTCACGCGCCGGTGACATATGTCCAACAACATGCGGTGGCGTAGTACAGTTAGAGGGATGTTACGTGAAATATGACAATGTTAAGTTTTTGGGCGTGGAGGATAAAACGGTGGTGTTGAAGAAATGTGGGTCTTCTATCGGGTATGACCCGAATACCCGAGATGCTGTGTTGGCTGGGTTGGTGGGTTCGGGTGGATATTTTCGGGTTGGTGGGTCGGGTCAGGTGAAGGGAACGGTGCAGTGTATTGGGGATTTGAGTTTTTTGGAGTGTCAGGATTGTGTTTCAGAGGCGGTCCGACGGCTGAGAAGTGATTGCCCGGCTGCGGATTACGGAGATATGTTTTTAGCCAAGTGTTATGCGAGGTACTCTACTGGTGGTGCTGGTGGTGGCCATGCTTATTCCAAATCTCATGGTAAATCAGACAACGATAATGAGAAGACATTTGCCATAATTATTGGATTATTAGCCGCTGTAGCTATACTTATAATCTTCCTAGCTTTCTTGAGAAGGATTTGTGAGGGACACCAAGGTAAATAA 840 0.4774 MVKTKTFISLLFFSIFILHSLSFSTDTFIYGGCTQQTFTSTSPYEFNLNSLLTSLVNSATYTSYNNFTIVASNPNDIAYGLYQCRGDLSMPDCASCVSRAVSRAGDICPTTCGGVVQLEGCYVKYDNVKFLGVEDKTVVLKKCGSSIGYDPNTRDAVLAGLVGSGGYFRVGGSGQVKGTVQCIGDLSFLECQDCVSEAVRRLRSDCPAADYGDMFLAKCYARYSTGGAGGGHAYSKSHGKSDNDNEKTFAIIIGLLAAVAILIIFLAFLRRICEGHQGK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04113 279 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Vivi3g04113 279 Gene3D - 25 130 IPR038408 -
Vivi3g04113 279 Gene3D - 154 226 IPR038408 -
Vivi3g04113 279 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Vivi3g04113 279 Pfam Salt stress response/antifungal 172 225 IPR002902 -
Vivi3g04113 279 ProSiteProfiles Gnk2-homologous domain profile. 131 228 IPR002902 -
Vivi3g04113 279 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 273 - -
Vivi3g04113 279 FunFam cysteine-rich repeat secretory protein 3 25 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04113 Vivi-Chr3 72125870 72128243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04113 8 224 Pollen Coat Proteome AT4G20670 24.066 2.32e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04113 - - gmx:100811615 367.081