Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04099 ATGAAGAGAGATCGCCAAGAAACCTCTGCTGGAGGAGGTGTGAATAGCAACAACAACAACAATAGCAACAACTTTGTTAGTGTACGAGGTGAATCTTCATCAATGCAGAGCAACAGCTTCAACGGCACAAACGGGAAACAAAGTTTGTGGAGGGAAGAAAAAGAAAACAGCGGCGGAATGGACGAGTTACTAGCGGCATTAGGTTACAAGGTTCGTTCTTCAGACATGCTTGACGTTGCTCAAAAGCTTGAACAGCTTGAGATGGTGATGGGTAGTGCTCAAGAAGAAGGAATCAACCACCTTGCTTCAGATACTGTTCACTACGACCCTACCGATCTATACTCATGGGTTCAAACCATGCTCACTGAACTCAACCCTTCCACCGATTCACAAATCAATGACCCTTTAGATGCTTCTTCTTCCATCTTCAACGATAACTCTCAGTATGATCTCAGTGTCATTCCTGGAATGGCCGCGTACCCACCTCAAAGCGTTACCCAGAACAACGAAAGCGAGGATTCTAACAGCAACAAGAGATTGAGGACATGGGGGAGCGAAACGGAGTCGGAAGATATTTTTCTGCCGGCGGTGGCTTTGTCTCCGCCGGCGGAGACTACGAGACCGGTGGTTCTCGTTGACTCGCAGGAAACTGGGGTTCATCTTATTCACACTATGATGGCATGCGCTGATGCGATTCAGCGTGATGATCTCAAGATTGCTGACAGACTGGTGAAGAATATTGGGATATTGGCTTCGTCGCAAACCGGAGCGATGGGGAAAGTCGCTTCGTATTTCGCACAAGCACTTTATCGGAGAATCTACAGAGTCTCACCAGATGAAACTCTGGATTCGTCTTTATCTGATGCTCTTCACATGCACTTCTATGAGTCTTCTCCTTATCTGAAATTCGCTCACTTCACAGCGAATCAAGCTATTCTGGAAGCTTTCGCCGGTGCCGGAAGTGTTCACGTTATTGATTTTGGTCTCAAACAAGGGATGCAGTGGCCGGCGCTTATGCAAGCACTTGCATTACGTCCCGGTGGTCCACCAATTTTCCGGTTAACCGGAATCGGGCCACCGCAGACGGGTAACACCGATGCTTTACAGCAGGTGGGTTGGAAATTGGCTCAGCTTGCTCAGACCATTGGTGTTCAGTTCGAGTTTCGTGGATTCGTTTGCAGCAGTCTCGCGGATCTTGACCCGAATATGCTCGAGATCCGACCCGGTGAAGCTGTTGCTGTTAACTCCGTTTTTGAGCTTCATACCATGTTGGCCCGACCCGGTTCCATTGATAGGGTTCTCAACACTGTTAAGAAGATTAACCCTAAGATTCTGACTATCGTGGAGCAAGAAGCGAATCACAACGGACCGGTTTTCATGGACCGGTTCACGGAGGCTTTGCATTATTACTCGAGTTTATTTGATTCTCTGGAGGGTTCTTCTAATTCGAACCAACCCGGGTCTGGTTCTTCGAGTCAGGATCTGTTGATGTCGGAGCTTTACTTGGGGAGACAGATATGCAACGTGGTGGCTTATGAAGGTGTGGACCGAGTCGAGAGACACGAGACATTGACTCAGTGGAGGTCGAGGATGAGTTCAGCTGGGTTCGACCCGGTTCATTTAGGTTCAAACGCGTTTAAGCAAGCGAGTACTCTGTTGGCTTTGTTCGCTGGCGGTGATGGGTATAGAGTGGAGGAGAATAATGGGTGTCTTATGCTTGGGTGGCACACGAGGTCACTCATTGCTACCTCCGCGTGGAAGCTTCCACTCATTGAGTCCAAGTGA 1785 0.4863 MKRDRQETSAGGGVNSNNNNNSNNFVSVRGESSSMQSNSFNGTNGKQSLWREEKENSGGMDELLAALGYKVRSSDMLDVAQKLEQLEMVMGSAQEEGINHLASDTVHYDPTDLYSWVQTMLTELNPSTDSQINDPLDASSSIFNDNSQYDLSVIPGMAAYPPQSVTQNNESEDSNSNKRLRTWGSETESEDIFLPAVALSPPAETTRPVVLVDSQETGVHLIHTMMACADAIQRDDLKIADRLVKNIGILASSQTGAMGKVASYFAQALYRRIYRVSPDETLDSSLSDALHMHFYESSPYLKFAHFTANQAILEAFAGAGSVHVIDFGLKQGMQWPALMQALALRPGGPPIFRLTGIGPPQTGNTDALQQVGWKLAQLAQTIGVQFEFRGFVCSSLADLDPNMLEIRPGEAVAVNSVFELHTMLARPGSIDRVLNTVKKINPKILTIVEQEANHNGPVFMDRFTEALHYYSSLFDSLEGSSNSNQPGSGSSSQDLLMSELYLGRQICNVVAYEGVDRVERHETLTQWRSRMSSAGFDPVHLGSNAFKQASTLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWKLPLIESK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04099 594 ProSiteProfiles GRAS family profile. 212 587 IPR005202 -
Vivi3g04099 594 Pfam Transcriptional regulator DELLA protein N terminal 61 128 IPR021914 -
Vivi3g04099 594 Gene3D - 59 124 IPR038088 -
Vivi3g04099 594 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 163 583 IPR005202 -
Vivi3g04099 594 Coils Coil 76 96 - -
Vivi3g04099 594 MobiDBLite consensus disorder prediction 1 55 - -
Vivi3g04099 594 MobiDBLite consensus disorder prediction 9 47 - -
Vivi3g04099 594 FunFam DELLA protein GAI 59 124 - -
Vivi3g04099 594 SMART DELLA_2 61 134 - -
Vivi3g04099 594 Pfam GRAS domain family 221 587 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04099 Vivi-Chr3 71709555 71711862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04099 46 588 GRAS Transcription Factor Family AT1G14920 59.783 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi3g04099 GRAS 2.4e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04099 K14494 - gmx:100799695 832.017