Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04093 ATGGATCCCAATCAACACAACTCTTGGTCTAATTTTATGCAAAATGGTGGCATTCCTCCTTCTATTCCAAATCAACAAAGCAACTCATGCATCACAAATATACCTCTTATCTCAAATTCACACCATAACCCAAATTTTCAAAACTCTCATTTTATCCCAAATTCACCAAATAATCCACACTTTGGAAATTACTCATATCATACACCACCTTATCCATATCAATATCAACAATTTACATCTCAACCAACTAACCCCAATATTCCTCATGTGGCTCAAATAGGTAGTAGTGGCATGCAATCAAATGATCAAGAACACGAAACACAACAATTTTGCACTCAAGATAGCGTAGAAACTATTAACCTTGGTGAAGAAGTTGTATCTGCACCGGTTGCAAAAACGCCTAAACAAAGGTTCCAACAAAAAGAGGATGAAGTTCTCATTCAATCATGGCTCAACGTTTCAAAGGATTCAATTGTTGGGGTTGATCAAAAAGGAGATAGTTTTTGGAACAGGATTGGCGAAGCTTACAACAAGCATCGTGACGCCAATTACAAAGAGAGGAAACCAATGGCACTTAAAGGTCGATGGCACAAAATTAATTCATCTGTTCAAAAGTTTGTTGGATGCTACAAACAAGCCGTGTCTACACAACAAAGTGGGAGCTCCGAGAGCAATATCATGCAAGCTGCATATAAAATTTATTTCCAAGATGAAGGTGAAAAGTTTATTTTTGAGGCTGCATGGAGATTATTGAAAGATGAACCTAAATGGCTCGCAGGTTCATTGGAAGCTTCTACAAAAAGAACAAAGAATTCAGCTTCAAGGGCATATTATTCATCTTCTAATCCACCGACACCAACGAGTAGCGAATACAATCCACCATCACCTACTTTGGCTCGTCGACCAATCGGTCAAAAGGCAGCCAAAAGGAAGGAGAAGGAAAAGTTTGTGGAAAAGTCTACTACTCCCAATGTCAAATATGATTCTTTGAAAGATGACTTCAAAAAAAAATTTGATTTGATGTCAACGTTTGCACGAGACTATGCACGTATTGAGGGTGAAAAAGTTGAGATAGAAAGAAAAAAGGTTGAGAGTGCAGAGGAAAGATTGAAGATGAATGATTTGCAAATACTTTCAAAAGATACATCAAATATGGATACAAGACAACTACAAGCTCATGAAATATTGTGCGACATGATTAGAGAAAAATATGGAATTAATTAG 1224 0.3701 MDPNQHNSWSNFMQNGGIPPSIPNQQSNSCITNIPLISNSHHNPNFQNSHFIPNSPNNPHFGNYSYHTPPYPYQYQQFTSQPTNPNIPHVAQIGSSGMQSNDQEHETQQFCTQDSVETINLGEEVVSAPVAKTPKQRFQQKEDEVLIQSWLNVSKDSIVGVDQKGDSFWNRIGEAYNKHRDANYKERKPMALKGRWHKINSSVQKFVGCYKQAVSTQQSGSSESNIMQAAYKIYFQDEGEKFIFEAAWRLLKDEPKWLAGSLEASTKRTKNSASRAYYSSSNPPTPTSSEYNPPSPTLARRPIGQKAAKRKEKEKFVEKSTTPNVKYDSLKDDFKKKFDLMSTFARDYARIEGEKVEIERKKVESAEERLKMNDLQILSKDTSNMDTRQLQAHEILCDMIREKYGIN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04093 407 MobiDBLite consensus disorder prediction 270 286 - -
Vivi3g04093 407 Pfam No apical meristem-associated C-terminal domain 241 389 IPR029466 -
Vivi3g04093 407 MobiDBLite consensus disorder prediction 270 317 - -
Vivi3g04093 407 PANTHER - 108 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04093 Vivi-Chr3 71587936 71589159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04093 132 314 Glutathione S-transferase Gene Family AT5G41240 36.923 7.64e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04093 - - vvo:131642220 602.438