Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04090 ATGTCCACCGTAAGAATTCAAGTTTCAGCGTGCGCTCTTTCCGCCACCGTCAACAACCTTCGTTATCGTCCAAACTACGTCGTTTCAACAAGCCGCTTCAACAACCATTTCAGCTTCAAACCCCTCAGAGTTTCAATGTCTTCCGTTCCTCCTTCCGAGCCCTTGGAAATTGCTGTCAAAGCTTCTATCACCTCACCCAACAAACTTGGAGACTGCCCTTTTACCCAAAGGGTATTGCTGACCCTGGAGGAAAAACATTTACCTTACGAGAAGAAATTGGTGGATTTAAGGAACAAACCAGAATGGTTCCTTGAAATCAGCCCTGAAGGTAAAGTTCCTGTAATAAATATTGATGGGAAGTGGGTTCCTGATTCAGATGTAATCACACAAACATTGGAAGAGAAGTATCCTAGCCCACCATTGGTGACTCCACCAGAAAAGGCGACAGTTGGATCAAAGATCTTTTCTACATTTATTGGATTTCTCAAGAGCAAAGATCCCAATGATGGAACAGAACAAGCATTACTAAATGAACTAAGCTCCTTCAACGATTACCTAAAGGAAAATGGTCCTTTTATCAATGGGAAAGACATATCTGCGGCTGACCTGTCACTTGGACCAAAGTTATACCATTTGGAGATTGCTTTAGGGCATTATAAGAAATGGGCAGTACCTGATTCACTTAACTTTTTGAAATCTTACTTGAAGGATATTTTCTCGAGGGAATCATTCATCAACACGCGTGCACAGCCGGAGGATGTCATTGAAGGTTGGCGTCCTAAAGTGGAGGGTTGA 795 0.4277 MSTVRIQVSACALSATVNNLRYRPNYVVSTSRFNNHFSFKPLRVSMSSVPPSEPLEIAVKASITSPNKLGDCPFTQRVLLTLEEKHLPYEKKLVDLRNKPEWFLEISPEGKVPVINIDGKWVPDSDVITQTLEEKYPSPPLVTPPEKATVGSKIFSTFIGFLKSKDPNDGTEQALLNELSSFNDYLKENGPFINGKDISAADLSLGPKLYHLEIALGHYKKWAVPDSLNFLKSYLKDIFSRESFINTRAQPEDVIEGWRPKVEG 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04090 264 CDD GST_N_family 72 133 - -
Vivi3g04090 264 CDD GST_C_DHAR 141 261 - -
Vivi3g04090 264 SUPERFAMILY GST C-terminal domain-like 135 261 IPR036282 -
Vivi3g04090 264 SUPERFAMILY Thioredoxin-like 71 138 IPR036249 -
Vivi3g04090 264 Gene3D - 142 264 - -
Vivi3g04090 264 FunFam Glutathione S-transferase DHAR3 chloroplastic 53 141 - -
Vivi3g04090 264 Gene3D Glutaredoxin 54 141 - -
Vivi3g04090 264 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 54 261 IPR044627 GO:0033355|GO:0045174|GO:0098869
Vivi3g04090 264 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 62 140 IPR004045 -
Vivi3g04090 264 SFLD Main (cytGST) 71 221 - -
Vivi3g04090 264 Pfam Glutathione S-transferase, N-terminal domain 71 140 IPR004045 -
Vivi3g04090 264 SFLD Glutathione Transferase (cytosolic) 71 221 IPR040079 -
Vivi3g04090 264 FunFam Glutathione S-transferase DHAR3, chloroplastic 142 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04090 Vivi-Chr3 71543025 71546054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04090 19 264 Glutathione S-transferase Gene Family AT5G16710 68.750 1.53e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04090 K21888 - gmx:732557 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04090 3 71543025 71546054 Vivi3g04090 3 71543025 71546054 ECH