Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04063 ATGTTCATGGGTCGCTTCTTTAGTGCATGGTTCAAAACTAAGCACAGTCCTCCGTATTATCGTTTGAATGATAGAGAAGATGGTACATTGAAGTGCTTCAGTTTAAATGATATAAAAACTGCTACAAGGAACTTAATTCAAGGGAGAGATGACAAGCTTTGTTGTGTAATTACTGTCAGGAAGGGGTGGATTGATGAGCATACATTAGCCCCCAGTAAACCAGATTCAGGTTTTGCAATTACTGTCAGGAAGCTTAACCAAGTGTGCCATCAGGATCACAATGAATTGTTGAGAATAATCAATATTATGGGACAACTGAGTCATCCCAATCTTGCGAAACTTATTGGTTATTGCTTAGAGGATATCCACCCCATTTTGGTATACGATTTTTCGCCCGAGGGAAGTTTGGACAATCATTTGTATAAAAGATCTTCTAATGTTCAGCCGCTATCATGGAAAAGCCGCATGAAGATAGCTCTTGATGCTGCTACGGCTCTTGCATATCTTCACGGTGATGAAGTCAACGTGATACATGGAGAATTAAATACTTCTAATATCTTAATAGATTCAAATCACAATGCAAAGATATTCGATTTCGGATTGAATAAAAATGAAAGGTTTAGGAGGTGCCAAGGTTTTGCAGTAATTTACGCAGCACCTGAGTACATAATGACAGGTTATCAAACCAAAATGGGTGATGTATACAGTTTTGGACTTGTTCTGTTGGAAATTATGTCTGGCAAATGTGTATTTGATAGAAATAGGCCACGAAATGAACGTAATTTAATCGAATGGGCCAAGCCGTTACTCTTGAACAAATGCAAGATATTCAAAGTCATGGATTGCTATATAGAAGGGCAATACTCGCCGCGTGAAGCAATGAAAGTAGCTTGCATTGTAATTTGTTGTCTGTCTGAAACACCAAAAAATAGACCAAACATGGATGAGGTGGTGACAGCATTGGAACAACTTCAGGATTCTGATGACACAATTGGAACAGCTTCTCCACTTTGTGGAAATTGA 1023 0.3851 MFMGRFFSAWFKTKHSPPYYRLNDREDGTLKCFSLNDIKTATRNLIQGRDDKLCCVITVRKGWIDEHTLAPSKPDSGFAITVRKLNQVCHQDHNELLRIINIMGQLSHPNLAKLIGYCLEDIHPILVYDFSPEGSLDNHLYKRSSNVQPLSWKSRMKIALDAATALAYLHGDEVNVIHGELNTSNILIDSNHNAKIFDFGLNKNERFRRCQGFAVIYAAPEYIMTGYQTKMGDVYSFGLVLLEIMSGKCVFDRNRPRNERNLIEWAKPLLLNKCKIFKVMDCYIEGQYSPREAMKVACIVICCLSETPKNRPNMDEVVTALEQLQDSDDTIGTASPLCGN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04063 340 Pfam Protein tyrosine and serine/threonine kinase 69 321 IPR001245 GO:0004672|GO:0006468
Vivi3g04063 340 SUPERFAMILY Protein kinase-like (PK-like) 78 328 IPR011009 -
Vivi3g04063 340 PANTHER OS01G0588500 PROTEIN-RELATED 29 325 - -
Vivi3g04063 340 Gene3D Phosphorylase Kinase; domain 1 19 130 - -
Vivi3g04063 340 Gene3D Transferase(Phosphotransferase) domain 1 132 334 - -
Vivi3g04063 340 ProSiteProfiles Protein kinase domain profile. 53 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g04063 340 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 131 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04063 Vivi-Chr3 70775545 70793187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04063 75 321 Receptor kinase-like Gene Family AT3G58690 38.931 2.23e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi3g04063 PK_Tyr_Ser-Thr 1.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04063 - - vvo:131661826 706.827