Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04056 ATGGACCCTAATCAATATAATTTTCAACAATGTATGTTCCATCTCATGCAAAATCAGCAAAATTTTAATCCTCAAAATTCTCAATTTCCCTCGCCGTCAACAAACTCTACCGTATTTTTTCCGCCACCAAACAACCCAAATATTTATTTTAGACCACCGATAAATACTCATGGGATGAATTTTTCTCATCATGAACCCGAAACACCAAATGGGTTTATGTCTGAACGCCAAGTTCCACAATTTTCAACTCAAGTTGGTATTGAAAATATTACAGTTGAAAAAGAACAAAGGCATCCAATTGTGGGAGTTGATCAAAAAGTCGATAGCTTTTGGTTAAGAATCACCGATAATTATAACCAATATCGTGGGCAGTCACGAGAAAAGCTACAAGGCCAATTAAAATCTCGATGGCATCGAATAAATGGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTCGTGAAAAAAAAAGTGGGGCATCAGAGAAAGATATCTTAGTCAATGCACATGCTTTTTTTGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGCGACTTTTAAAAGATGAACCTAAATGGATGGGAGCATCCATTGAAAATTCTTCAAAGAGAACAAAGAATTTTGTTAGCGGTGCATACACGACATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAATGGAGCGTCCAATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGAAAAATGCAAATGCAACTGAACCTCCTTCTAGTGTTATTTCTGATACAATGAATAAAAGAATGGAAGTAATGGAAAACCTTGCACGACTTAAGGAGGAAGAAAACAAATTAGTTAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTCTAAGATGAACGATAGTCAACGTGAATTTCATGAAAAACGTTGTAATAACCTAAAAGAAAAATATGGATGGTAA 999 0.3624 MDPNQYNFQQCMFHLMQNQQNFNPQNSQFPSPSTNSTVFFPPPNNPNIYFRPPINTHGMNFSHHEPETPNGFMSERQVPQFSTQVGIENITVEKEQRHPIVGVDQKVDSFWLRITDNYNQYRGQSREKLQGQLKSRWHRINGLVQKFVGCYKQAVREKKSGASEKDILVNAHAFFEQDEGAPFNLEYAWRLLKDEPKWMGASIENSSKRTKNFVSGAYTTSPNSETPSSYEFNSSSPMERPMGQKAAKRKGKAKKNANATEPPSSVISDTMNKRMEVMENLARLKEEENKLVKEKMEFEAMQFIMSDTSKMNDSQREFHEKRCNNLKEKYGW 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04056 332 PANTHER - 74 328 - -
Vivi3g04056 332 MobiDBLite consensus disorder prediction 214 240 - -
Vivi3g04056 332 Coils Coil 267 301 - -
Vivi3g04056 332 MobiDBLite consensus disorder prediction 214 267 - -
Vivi3g04056 332 Pfam No apical meristem-associated C-terminal domain 182 321 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04056 Vivi-Chr3 70612361 70613442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04056 97 288 Glutathione S-transferase Gene Family AT5G41240 32.500 1.37e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04056 - - vvo:131607299 568.54