Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03987 ATGGAAGCACTATCCCTTTCCCTTCCCACAATCACCGTTACCAATTCCAATCTCAACTACCCTTCTCTCAGTGCCGCTTCTAGTTATGCCTCACTCTCTTCCTTACAACACCGTCCTTCTTCCTCAACCATACTCTTCACTGTGAAGAAGAGTGTTGTTCGTGTGCAAGCTGAGAATGAAGATTTTGAATTGAAGCAAGTGAGGGATATGGCTGCTGCCAAAAAGAGATGGGAAGCTCTGCTCCGGGAAGAAAAAATTAAGGTTCTTACACCAAAGGAAGCTGGGTATGCAGTTCAGCTTTCAAACAAGCCCCTTCTTGATGTCCGCCCCTCGAATGAACACAGCAAGGCATGGGTGAAAGGTTCGACCTGGATTCCAATATTTGATGTCGATAATGGGCTAGATATTGGAACTATTCCTAGAAAAGTTTCAAACTTTGCTATGGGCGGTTGGTGGAGTGGCATGCCTACACTGTCTTTTGACAACTCGTTCTTACCCAAAGTTATGGAGAAGTTCCCAAAAGATGCAGAATTAATCGTTGCATGCCAGAAGGGACTGAGATCACTAGCTGCATGTGAACAACTGTACAATGCTGGCTACACAAACCTGTTCTGGGTTCAAGGAGGCTTCGAGGCTGCTGAAGAAGAGGATCTTGTAGTGGAAGGTTCAGTGCCACTCAAGTTTGCTGGAATTGGTGGTGTCTCGGAGTTTCTTGGTTGGACAGATCAACAGAGAGCCGCTGCAGCCAAGGAAGGCTGGGGATACAGATTAGTGTTTTCTGCACGCCTGATTGGACTATTTCTTGTTGCCGACGCATTATTTATCGGTGCTCAGCAAGTTGGACGCTATCTTCAGGAAATCAGGACCCATTGA 873 0.4639 MEALSLSLPTITVTNSNLNYPSLSAASSYASLSSLQHRPSSSTILFTVKKSVVRVQAENEDFELKQVRDMAAAKKRWEALLREEKIKVLTPKEAGYAVQLSNKPLLDVRPSNEHSKAWVKGSTWIPIFDVDNGLDIGTIPRKVSNFAMGGWWSGMPTLSFDNSFLPKVMEKFPKDAELIVACQKGLRSLAACEQLYNAGYTNLFWVQGGFEAAEEEDLVVEGSVPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLIGLFLVADALFIGAQQVGRYLQEIRTH 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03987 290 ProSiteProfiles Rhodanese domain profile. 99 222 IPR001763 -
Vivi3g03987 290 SMART rhod_4 89 219 IPR001763 -
Vivi3g03987 290 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 83 221 IPR036873 -
Vivi3g03987 290 CDD RHOD 105 212 - -
Vivi3g03987 290 Pfam Rhodanese-like domain 95 212 IPR001763 -
Vivi3g03987 290 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 19 288 IPR044664 -
Vivi3g03987 290 Gene3D - 86 255 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03987 Vivi-Chr3 69046156 69049657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03987 1 290 Sulfurtransferasese or Rhodanese AT4G24750 67.230 3.28e-142 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03987 - - vvo:131656045 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03987 3 69046156 69049657 Vivi3g03987 3 69046156 69049657 ECH