Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03986 ATGGAAGCACTATCCCTTTCCCTTCCCACAATCACCGTTACCAATTCCAATCTCAACTACCCTTCTCTCAGTGCCGCTTCTAGTTATGCCTCACTCTCTTCCTTACAACACCGTCCTTCTTCCTCAACCATACTCTTCACTGTGAAGAAGAGTGTTGTTCGTGTGCAAGCTGAGAATGAAGATTTTGAATTGAAGCAAGTGAGGGATATGGCTGCTGCCAAAAAGAGATGGGAAGCTCTGCTCCGGGAAGAAAAAATTAAGGTTCTTACACCAAAGGAAGCTGGGTATGCAGTTCAGCTTTCAAACAAGCCCCTTCTTGATGTCCGCCCCTCGAATGAACACAGCAAGGCATGGGTGAAAGGTTCGACCTGGATTCCAATATTTGATGTCGATAATGGGCTAGATATTGGAACTATTCCTAGAAAAGTTTCAAACTTTGCTATGGGCGGTTGGTGGAGTGGCATGCCTACACTGTCTTTTGACAACTCGTTCTTACCCAAAGTTATGGAGAAGTTCCCAAAAGATGCAGAATTAATCGTTGCATGCCAGAAGGGACTGAGATCACTAGCTGCATGTGAACAACTGTACAATGCTGGCTACACAAACCTGTTCTGGGTTCAAGGAGGCTTCGAGGCTGCTGAAGAAGAGGATCTTGTAGTGGAAGGTTCAGTGCCACTCAAGTTTGCTGGAATTGGTGGTGTCTCGGAGTTTCTTGGTTGGACAGATCAACAGAGAGCCGCTGCAGCCAAGGAAGGCTGGGGATACAGATTAGTGTTTTCTGCACGCCTGGGTTCTTGCATAGATTGGACTATTTCTTGTTGCCGACGCATTATTTATCGGTGCTCAGCAAGTTGGACGCTATCTTCAGGAAATCAGGACCCATTGAGATTCTACGGCTACATTTGA 906 0.4625 MEALSLSLPTITVTNSNLNYPSLSAASSYASLSSLQHRPSSSTILFTVKKSVVRVQAENEDFELKQVRDMAAAKKRWEALLREEKIKVLTPKEAGYAVQLSNKPLLDVRPSNEHSKAWVKGSTWIPIFDVDNGLDIGTIPRKVSNFAMGGWWSGMPTLSFDNSFLPKVMEKFPKDAELIVACQKGLRSLAACEQLYNAGYTNLFWVQGGFEAAEEEDLVVEGSVPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLGSCIDWTISCCRRIIYRCSASWTLSSGNQDPLRFYGYI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03986 301 ProSiteProfiles Rhodanese domain profile. 99 222 IPR001763 -
Vivi3g03986 301 SMART rhod_4 89 219 IPR001763 -
Vivi3g03986 301 Pfam Rhodanese-like domain 95 212 IPR001763 -
Vivi3g03986 301 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 83 221 IPR036873 -
Vivi3g03986 301 CDD RHOD 105 212 - -
Vivi3g03986 301 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 19 265 IPR044664 -
Vivi3g03986 301 Gene3D - 86 255 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03986 Vivi-Chr3 69046156 69049663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03986 1 263 Sulfurtransferasese or Rhodanese AT4G24750 67.658 3.31e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03986 - - vvo:131656045 578.17