Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03985 ATGATAAAGGTGGCAGCCGTCATGCATGACTTACACATGATCCATACTGATCTGAAGCCTGAGAACATTCTTCTGGTTTCATCGGATTATCTTAAAGTCCCTGATTACAAGAGTTCATCCAGAGCACCGTTCTCCTTTTTCAAAAGAGTGCCCAAGTCAAGCGCCATAAAGGTTATTGATTTTGGCAGCACCACATATGAACGAGAAAACCAGAATTACATTGTATCAACACGTCATTATAGAGCACCCGAAGTTATCCTTGGACTTGGGTGGAGCTATCCATGTGATGTATGGAGTGTGGGTTGTATATTAGTCGAGTTATGCACTGGTGAAGCTTTATTTCAGACTCATGAAAATTTAGAGCATCTTGCTATGATGGAGAGGGTGCTTGGTCCATTACCACAGCAGTTATTGAAGAGAGTCGACCGACATGCTGAGAAGTATGTCCGAAGGGGGAGACTGGACTGGCCAGAGGGTGCAACTTCGAGGGAGAGTATTAAAGCTGTAATGAAGCTTCCTCGTCTGCAGAACCTTATAATGCAGCATGTTGATCATTCGGCTGGAGATCTTATACATCTATTGCAGGGGCTACTTAGGTTTGACCCCTTTGAAAGAGTTACCGCTAGGGATGCTCTGAGACATTCATTCTTTATGAGAGATCACCTTAGGAGATGA 675 0.4385 MIKVAAVMHDLHMIHTDLKPENILLVSSDYLKVPDYKSSSRAPFSFFKRVPKSSAIKVIDFGSTTYERENQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQQLLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRFDPFERVTARDALRHSFFMRDHLRR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03985 224 SUPERFAMILY Protein kinase-like (PK-like) 6 220 IPR011009 -
Vivi3g03985 224 Pfam Protein kinase domain 6 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03985 224 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 6 220 - -
Vivi3g03985 224 Gene3D Transferase(Phosphotransferase) domain 1 5 217 - -
Vivi3g03985 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 13 25 IPR008271 GO:0004672|GO:0006468
Vivi3g03985 224 FunFam Serine/threonine-protein kinase AFC2 1 217 - -
Vivi3g03985 224 SMART serkin_6 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03985 224 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03985 Vivi-Chr3 69035311 69037522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03985 8 221 MAP Kinase Gene Family AT4G11330 29.302 4.52e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Vivi3g03985 Pkinase 5.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03985 K08287 - gmx:100808961 424.091