Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03982 ATGTTCCAATATCTACCTTCATTTCTGAAGCACGATCTAAATACCACCCTTTTCATGTTTCTTTCCTTCTTCATCAGCATACTGCTGGTGTTGAAGTTCACAAAAATAAACAAATTAAATCAACCTCCATCTCCACCTGGATTGCCAATAATTGGCAACTACCTTCAACTAGGAACACTACCTCATCGTTCTTTTCATTCCCTATCACAAACGTATGGTCCTCTAATGCTGTTGCATCTTGGCCAGCTTCGTGTGTTGGTGGTTTCCTCAGTAGATATGGCCAAAGAAGTCATGTATACACATGACACGATATTTGCGAGCCGGCCGAACCTGATATCAACAAAAGCTTTACTCTATGGATGCAAGGACGTCGCGTTTGCAACTTATGGTGATACATGGAGACAGAAAAAGAAACTGTGTGTGATTGAGTTGTTGAGTCAGAAAAGGGTGCAATCAGTAGAGTTTATTAGAGAAGAGGAAGCCATGGCATTGGTTGATAAGATACGTAAAGCGTTGAGTTTGAGTGAAGGTTGTTGCACTGTGAACCTTAGTGAGATGTTGATAGCAACTGCAAACAACATTATCTGTAGGTGTATGTTTGGAAAAAAATATGATGATGATGATGGTTGCAGATTCGGAGAGCTTGCGAGGCAGATAATGATTCAAGTTTCAGATTTTAGTATGGGAGATTTGTTTCCTTCGTTGAGTTGGGTTGATGTTCTTACTGGCCAAATTAAAAAATTTAAGACTACTTTCAAAGAAATGGACGATTTCTTTGATCAAATAATTGTAGGGCGTAGGATGGCCAGGAGAGACCCCAACAAGAAAGATTTCCTCGACATTCTGCTTCAACTTCAGGCTGATGGTCTTTCAGAGTTCGACCTCACAGAAAATGACTTAAAAGCAGTCTTAATGGACATGTTTTTAGGAGGAAGTGACACAAGTTCAACAACAGTTGAATGGGCTATGGCAGAACTTGTAAAAAATCCAGTCATAATGAAGAAAGCACGGGAGGAGGTAAGGAGAATTGTAGGGAATAAATCAAAAATAGAGGACAGTGATGTTGATCAAATGGACTACATGAAATGTGTGATTAAAGAAACTTTGAGGCTGCACCCAGCTGCTCCTCTTTTGGCTCCTAGAGAAACAACATCTAGTGTTAAACTTGGAGGGTATGATATTCCTGAAAAAACATTGGTATATATCAATGCATGGGCAATCCAGATGGACCCTGCATTTTGGGAAATGCCAGAAGAGTTTCTACCTGAGAGATTTGAAAATAACAAGGTTAATTTCAATGGTCAAGACTTTCAATTTATCCCGTTTGGTTCTGGGAGAAGAAAATGCCCTGGTATTGGGTTTGGACTTGCTTCCGCCGAGCATACGGTTGCTAATCTTTTGTATTGGTTTGACTGGAAGCTACCTACAACTGATGATGCATCTCTTCAAGAAATAGACATGACTGAGAAATTTGGACTCACTGTCAACAAGAAAGTTCCTCTTTACCTCCAACCAATACCAAACAATAATTTCAAAGAATAA 1542 0.3962 MFQYLPSFLKHDLNTTLFMFLSFFISILLVLKFTKINKLNQPPSPPGLPIIGNYLQLGTLPHRSFHSLSQTYGPLMLLHLGQLRVLVVSSVDMAKEVMYTHDTIFASRPNLISTKALLYGCKDVAFATYGDTWRQKKKLCVIELLSQKRVQSVEFIREEEAMALVDKIRKALSLSEGCCTVNLSEMLIATANNIICRCMFGKKYDDDDGCRFGELARQIMIQVSDFSMGDLFPSLSWVDVLTGQIKKFKTTFKEMDDFFDQIIVGRRMARRDPNKKDFLDILLQLQADGLSEFDLTENDLKAVLMDMFLGGSDTSSTTVEWAMAELVKNPVIMKKAREEVRRIVGNKSKIEDSDVDQMDYMKCVIKETLRLHPAAPLLAPRETTSSVKLGGYDIPEKTLVYINAWAIQMDPAFWEMPEEFLPERFENNKVNFNGQDFQFIPFGSGRRKCPGIGFGLASAEHTVANLLYWFDWKLPTTDDASLQEIDMTEKFGLTVNKKVPLYLQPIPNNNFKE 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03982 513 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 FunFam Cytochrome P450 83B1 29 504 - -
Vivi3g03982 513 Pfam Cytochrome P450 42 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 CDD CYP71-like 71 501 - -
Vivi3g03982 513 PANTHER CYTOCHROME P450 71B11-RELATED 26 506 - -
Vivi3g03982 513 SUPERFAMILY Cytochrome P450 42 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 Gene3D Cytochrome P450 29 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g03982 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03982 Vivi-Chr3 69006119 69008146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03982 22 506 Cytochrome P450 AT5G25180 42.653 2.51e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03982 K20617 - qsa:O6P43_022640 586.26