Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03947 ATGCTTCATCCAAACACACTCTTAGAGCTTCCACAAATGTTTCCAGAAACAGTACTTGTCCAAAGAAGAAGAACTGGGGTTATTCTTGCATCGCATCCCTCCTTGCACGTGATAAGCATATGTAACAGAATACACTCCATCCAATTCGTGGTGCCAAATAAGTCTCCAAAATTGCTTTCCCAGAAGACTGATATTGAAATCACAAATGCCTCTAAAGCCAATTCCTCCATCTCTTTTAGACTCTCGCGAAAAGCGCTAGCTAGTGATGTAATACTAAATACTTTACAAGACAGAAGAGCAATGGAATACACTATTATAGTGGCTGAAACAACAAATTCCCCAGCTACATTACAATACCTCGCGCCTTATACAGGAGCAGCTCTGGCTGAATATTTTATGTGTCGTGAACGTCACACTTTAATCATTTATGATGATCCCTCCAAACAAACACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCTTATCCCGGAGATGTTTTTTATTTACATTCACGTCTTTTGGAAAGAGCCGCTAAATTAATTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCAGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCGAATATTCTTATCTGCTGATTTATTCAATGCTGGGATCAGACCTGCAATTAATGTGGGTATTTCCGTTTCCAGAGTTGGATCGGCGGCTCAAATAAAAGCCATGAAAAAAGTAGCTGGCAAATTAAAATTGGAATTGGCACAATTCGCGGAATTAGAAGCTTTTGCACAATTCTCTTCAGATCTCGATAAAGCTACGCAAAATCAATTGGCAAGAGGTCGACGATTGCGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTTACTGTGGAAGAACAGATAATAACTATTTATACTGGAACGAATGGTTATCTTGATTCATTAGAAATTGAACACACAAGCAAATTTATCGTTGAGTTACAGGATTATTTAAAAACGAATAAACCTAAATTCAACGAAATCATATATTCTACCAAGACATTCACTGGGGAAGCAGAAGCCATTTTGAAGGAAGCTATTCAGGAACAGATGGAACTCTTTTTACTTCAGGAACAAGTAGAAAAAAATTGA 1179 0.3851 MLHPNTLLELPQMFPETVLVQRRRTGVILASHPSLHVISICNRIHSIQFVVPNKSPKLLSQKTDIEITNASKANSSISFRLSRKALASDVILNTLQDRRAMEYTIIVAETTNSPATLQYLAPYTGAALAEYFMCRERHTLIIYDDPSKQTQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLISQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGRIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAELEAFAQFSSDLDKATQNQLARGRRLRELLKQSQSAPLTVEEQIITIYTGTNGYLDSLEIEHTSKFIVELQDYLKTNKPKFNEIIYSTKTFTGEAEAILKEAIQEQMELFLLQEQVEKN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03947 392 Pfam ATP synthase alpha/beta chain, C terminal domain 254 378 IPR000793 GO:0015986
Vivi3g03947 392 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 255 382 - -
Vivi3g03947 392 CDD ATP-synt_F1_alpha_C 258 383 IPR000793 GO:0015986
Vivi3g03947 392 FunFam ATP synthase subunit alpha 255 385 - -
Vivi3g03947 392 ProSitePatterns ATP synthase alpha and beta subunits signature. 238 247 IPR020003 GO:0005524
Vivi3g03947 392 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 58 383 IPR005294 GO:0015986|GO:0045261|GO:0046933
Vivi3g03947 392 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 80 247 IPR000194 GO:0005524
Vivi3g03947 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 253 IPR027417 -
Vivi3g03947 392 FunFam ATP synthase subunit alpha, mitochondrial 55 254 - -
Vivi3g03947 392 Gene3D - 255 383 IPR038376 -
Vivi3g03947 392 Gene3D - 60 254 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03947 95 260 Primary Pumps ATPases(2) AT1G76030 29.167 1.20e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03947 K02111 - gmx:3989298 503.827