Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03910 ATGCAGTCCGCCGCTTTCACTCTCTCCCCTTCTCTCCCTCTCCGTAATCTCAACCGCCAAAACACCAACCGTTTAACTCGCTCCTCCACTAACCTCCGTATCTCCGCCAAATTAAACGACGGCGTAAATCTCAATGGCGCCTCCTCTTCTTCCTCCTCCTTCACTCGTAAATCATGGTCTCTTTCTCCTTCATCTTCTTTCAAATTCAGACCTCTCCCTCTCCTTTCCACCTCCGATCTTTCTCCTCCTAAAGCCACTTCCGAAAGCGCCGCTGAATCTGCTGACTCCGGTTCTTTGCTCAAAACTCTTCAACTTGGATCCTTGTTCGGTTTGTGGTACCTCTTCAACATCTACTTCAATATCTACAATAAACAGGTTTTGAAGGCGTGTCATTTCCCTGTAACTGTTACTGTAGTTCAATTTGCGGTTGGGACTGTTCTCGTATCAGTTATGTGGGCTCTTAATCTCTACAAGAGGCCTAAAATCAATGGCGCCATGCTTGCAGCTATATTTCCACTAGCTATTGTGCATACTTTGGGGAACCTTTTCACTAATATGAGTCTTGGAAAGGTGGCTGTGTCTTTTACTCACACCATTAAAGCTATGGAGCCTTTCTTTTCGGTTATCCTTTCTGCCATGTTTCTTGGAGAGAGACCTACACCTTGGGTGATTGGTTCCCTTGTTCCTATTGTTGGTGGAGTTGCTCTGGCGTCTGTTACGGAGGCGTCTTTCAATTGGGCTGGGTTTTGGAGTGCAATGGCTTCCAATGTGACAAACCAATCACGTAATGTTCTTAGCAAAAAGGTCATGGTTAAACAAGAGGAATCCTTGGACAACATAACTCTCTTCTCTATAATTACAATAATGTCCTTCTTCTTGTTAGCACCTGCTGCTATCTTCATGGAGGGTGTCAAATTCACCCCTGCTTACCTGCAATCTGCTGGATTAAATGTTAGACAAGTGTACACCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCTTACATGATATTGCAGAGGGTATCACCTGTTACCCATTCCGTCGGTAATTGTGTGAAGCGTGTTGTGGTTATTGTGAGCTCTGTGATCATCTTCAAAACACCCGTCTCTCCTGTGAATGCTTTAGGAACCGCTGTTGGTCTTGCTGGTGTTTTCCTCTACTCAAGGGTGAAGCGAATTAAGTCAAAGCCAAAGGCAGTTTAA 1218 0.4475 MQSAAFTLSPSLPLRNLNRQNTNRLTRSSTNLRISAKLNDGVNLNGASSSSSSFTRKSWSLSPSSSFKFRPLPLLSTSDLSPPKATSESAAESADSGSLLKTLQLGSLFGLWYLFNIYFNIYNKQVLKACHFPVTVTVVQFAVGTVLVSVMWALNLYKRPKINGAMLAAIFPLAIVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGERPTPWVIGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKQEESLDNITLFSIITIMSFFLLAPAAIFMEGVKFTPAYLQSAGLNVRQVYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFKTPVSPVNALGTAVGLAGVFLYSRVKRIKSKPKAV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03910 405 Pfam Triose-phosphate Transporter family 103 393 IPR004853 -
Vivi3g03910 405 PANTHER SOLUTE CARRIER FAMILY 35 104 399 - -
Vivi3g03910 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 239 - -
Vivi3g03910 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 396 - -
Vivi3g03910 405 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 103 403 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03910 Vivi-Chr3 67735479 67738885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03910 1 403 Antiporters AT5G33320 68.510 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03910 K15283 - gmx:100804563 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03910 3 67735479 67738885 Vivi3g03910 3 67735479 67738885 ECH