Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03908 ATGGAAGAAACATTTGTTCCTTTTCGCGGAATTAAGAATGATTTCAAAGCAAGAATTATGTGCTACAAACAAGATTGGACTAGTGGATTCCGCGCAGGTGCAAGGATCCTTGCACCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATATCATTTGGCGAGCAACTCGAGAGAACTACTGGTACACAAATATTTTTCAGGTTCAGTCTCTTGGTGTTTGTTTATGTCATATTATATGCTAAGAAGTTATATTATACAGATGGAACTCTCACTGCTGTGCAGACTCTTGCATCAACTGCACTATGTGGTATTGTCCACTCGGTTATTGGAGGGCAACCTCTCCTCATACTAGGTGTAGCCGAGCCAACCGTTTTGATGTATACATTCATGTACAATTTCGCAAAGGATCGTGAGGATTTAGGACACAAATTATTCTTGCCTTGGACTGGATGGGTGTGCGTTTGGACTGCACTGTTGCTGTTCTTGCTGGCTATTCTCGGTGCATGCTCCATAATCAACCGGTTCACGCGCCTTACCGGTGAACTATTTGGTCTGTTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTACCAAAGACACAGACAGAAGGTACCAATCAGATTGCACTTCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTAGTTTTGTCGTTCGGCCTTCTTTTTACCGGTCTGGGAAGCCGCAAGGCTAGATCCTGGCGTTACGGGACAGGTTGGCTACGAGGATTTATAGCTGATTACGGAGTCCCCTTAATGATTCTCGTATGGACTGCTGTATCTTACATACCTGTCAACAAGGTCCCAAGGGGAATCCCGAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTAAAGGAAATGTTGAATGTGCCTCTATTGTACATTATTGGAGCATTTATACCAGCAACTATGATTGCCGTGCTTTACTACTTCGATCACAGCGTTGCATCACAACTCGCGCAGCAAAAAGAGTTCAATCTAAGAAAACCTCCATCTTATCATTATGACTTACTACTCCTCGGATTTTTGACCTTATTCTGCGGGCTTATTGGAATCCCTCCTTCCAACGGTGTGATTCCACAATCTCCAATGCATACCAAGAGCTTAGCTACTCTAAAACATCAGATTTTACGGCATAAGCTTGTCTCTACTGCACGAACGAGCATGGGGAAAAACATGAACCTGAGTCAGTTTTACGAAAGTATGAAAGAAGCATATGACGTAATGCAGACGCCATTGGTTTCCCAAATGCCATCCACCTTGGGGCTGAAAGAGTTGAAGGAGTCTACCGTTGCACTTGCTTCAAGTCATGGATACATTGATGCTCCTGTTGATGAAATCGTCTTTGATGTGAATAAGGATGTTGATGACCTTATGCCAGTCGAAGTTAAAGAGCAGCGACTCAGTAATTTACTGCAGGCATCAATGGTTGCGGCTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCGGTGCTTTGGGGTTACTTTGCCTTCATGGCTATTGAAAGCTTGCCGGGAAATCAGTTTTGGGAGAGAATATTGTACCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAACACCATGCCACTTTTGTTGAGACTGTGCCTTTGAAAGCAATTGCTCTGTTTACTCTGTTCCAGACAGCTTACTTGCTTCTCTGCTTTGGCATAACCTGGATACCAATCGCCGGGGTCCTCTTCCCGTTGTTAATCATGCTTCTTGTCCCGGTTCGGCAATATTTTCTTCCTCATTTTTTCAAAGGAGCCCATCTACAAGAGTTGGACGCCGCATCATACGAGGAAGCACCGGCCATTGCTTTCAACATGTCCTTTGATGACCTAAGTAACCATGGAAATATGGCCAATGTCAGTGGTGGAGAAATTCTTGATGAGATTATCACGAGGAGTCGCGGAGAGATACGTCGCACTCAAAGCTCTAAAGCATCTAGTTCATCTGCAACACCAATAGGAGGAGATATAAGGCCTGCTAATAGCCCGCAAATATCACGAACGATTCCTAGCCCTCGAGTAACCGCATTGAGAGGGGAAAGCAGCAGCGCAGGATCAAACGGAAAGGAGTTAAAGTTAAAGCAAATTCCTTGA 2202 0.441 MEETFVPFRGIKNDFKARIMCYKQDWTSGFRAGARILAPTTYIFFASAIPVISFGEQLERTTGTQIFFRFSLLVFVYVILYAKKLYYTDGTLTAVQTLASTALCGIVHSVIGGQPLLILGVAEPTVLMYTFMYNFAKDREDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIINRFTRLTGELFGLLIAMLFMQQAIKGLVEEFGVPKTQTEGTNQIALQSSWLFGNGMFALVLSFGLLFTGLGSRKARSWRYGTGWLRGFIADYGVPLMILVWTAVSYIPVNKVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSYHYDLLLLGFLTLFCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRHKLVSTARTSMGKNMNLSQFYESMKEAYDVMQTPLVSQMPSTLGLKELKESTVALASSHGYIDAPVDEIVFDVNKDVDDLMPVEVKEQRLSNLLQASMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEHHATFVETVPLKAIALFTLFQTAYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYFLPHFFKGAHLQELDAASYEEAPAIAFNMSFDDLSNHGNMANVSGGEILDEIITRSRGEIRRTQSSKASSSSATPIGGDIRPANSPQISRTIPSPRVTALRGESSSAGSNGKELKLKQIP 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03908 733 MobiDBLite consensus disorder prediction 676 725 - -
Vivi3g03908 733 PANTHER ANION EXCHANGE PROTEIN 2 636 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vivi3g03908 733 Gene3D Helical hairpin bin 18 60 - -
Vivi3g03908 733 MobiDBLite consensus disorder prediction 672 733 - -
Vivi3g03908 733 FunFam probable boron transporter 2 18 60 - -
Vivi3g03908 733 Pfam HCO3- transporter family 87 208 IPR011531 GO:0006820|GO:0016020
Vivi3g03908 733 Pfam HCO3- transporter family 488 578 IPR011531 GO:0006820|GO:0016020
Vivi3g03908 733 Pfam HCO3- transporter family 230 401 IPR011531 GO:0006820|GO:0016020
Vivi3g03908 733 Pfam HCO3- transporter family 7 69 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03908 Vivi-Chr3 67689682 67694365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03908 1 714 Antiporters AT2G47160 72.168 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03908 K24194 - gmx:100793554 1211.44