Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03876 ATGCAAAAAATGAGTCTAAACCTCGTCTGGTTCTGGACAGTACTCACCTTTCTGTTTCTGTTTTTGCTTATGACCAATTCAGAATCAGAACATGTCAGACAAGCCCTTGTCACCTTCATGCATAAACTCGAACCACCTCATCAGAATTCCATATCGGGTTGGAACCTCACATCAGATCCTTGCACTCATAACTGGCACGGAGTAACTTGCTACACAAGCAACCAGTACATTAAGAGCATAGTTCTTGAAAACCTCAACTTCACTGGTGTTCTAGACGCGACTTCTCTTTGCATTGCTAGCAATCTTCAATTCCTCAGCCTCAACAACAATTACTTACACGGTTTTATGTCAGAGGATATAAGAAACTGCAAGTTCTTGACGCACTTGCTTCTTAGTGGTAACAAATTCTTTGGCAATCTTCCTCTTGCCATTCCTCAACTACGGAACCTGAAGCGCCTTCATGTTTCGGACAATCACTTCACCGGAAACCTTCCGAATATGGTTAATGTTACAAGCTTGATATCCTTTCTAGCTCAAAACAATGCCTTCACTGGTCAGATTCCTGATTTTGATTTCTCAAATTTTGAAGCTTTTAATGTCTCTAACAACAATTTACGCGGTCCTATTCCTGATGTTGAAGGCATTTTTAAAGCAAATAGTTTTTATGGTAATCCTAATTTATGTGGAAAACCAATTTCAAACTCTTCATGTCCACCACCACCTTTTCGTCGTCCTCCTCCAATTGTTAAGAAAGACAGAAATAAAAATGCATTTATCGATGATTTGCTAATCTATTCAGGTTATATAGCTCTTGGTTTAATTTTCATTATTTTCTTGATCTTCAAGTTGTTAAAAAAATGCAAGACCAAAGATAAAGAAAAAGTATTAAATCATGTTGAAAAGAAGGAAATGTCACAGGACCCTAGTTTTGTTGTTGGTGGTGAAAAGCTTAGTGAGATATTAAATTCCAATGGATCGAAGAGTTGGTTTAATGGCCTCGGGATAAAATCGGAGTATTCTATGACATCCATGGAAAGTGGAGTGACTACATCAGGTCTTGTTCTTCTTTCAAGTAGAAAGCTTAGAGGTTTACAATTTGAGGATTTGTTAAGTGCTCCTGCCGAATTGATTAGGCGAGGAAAACACGGAAGCCTATACAAGGTTATGCTAGATTATGGAGTACTTTTAGCTGTTAAGAGGATCAAGGATTGGGGAATTTCAAAGCATGAGTTTGAGAGAAGGATGAACTTGATAGCTCAAGTGAAGCATCCTCTTGTAATGTCACCGGTCGCGTACTATTGCTCTCAGCAAGAGAAGCTTCTGGCTTATGAATATCTTCCAAATGGTAGCCTCTTCATGTTGCTCTATGGATCTCACAGTGGACACTCTCTTGACTGGAGGAGCAGACTAGATGTTGCTGTAAAGATAGCGGAATCTTTGGCCTATATGCATGCGGAGCTTGGTGATAGTGGAATAGCACATGGTAACTTAAAATCAAGTAACATTCTGTTTGACAAGAATATGAATCCGCAAATAAGCGAATATGGACTAATGATGGCTGAAAACCGAGGAGTTATTTCCCATAGAAAAAGCCTCGGAAACAGAAATATGTCTCCAGCAGCCACCTTCAGAGCTGATATATATGCATTTGGAGTCATACTTCTCGAACTCCTGACGGGGAAAGTAGTTAAAAATGATGGATTTGATTTGGTTAAATGGGTGAATTCGGTGATCAGTGAGGAATGGACGGCAGAAGTTTTTGACAGGTCCTTAATCTCACAAGGTGCTTCTGAAGAGAGGATGGTGAACTTGTTGCAGGTGGCACTGAAATGCATAAATCCTTCTCCAAATGATAGGCTAAGTATGAGTCAAGTGGCAGTCATCACAAACGCGTTGAAAGACGAAGACGACAAATCCATATCTTTTGACACATGA 1935 0.3959 MQKMSLNLVWFWTVLTFLFLFLLMTNSESEHVRQALVTFMHKLEPPHQNSISGWNLTSDPCTHNWHGVTCYTSNQYIKSIVLENLNFTGVLDATSLCIASNLQFLSLNNNYLHGFMSEDIRNCKFLTHLLLSGNKFFGNLPLAIPQLRNLKRLHVSDNHFTGNLPNMVNVTSLISFLAQNNAFTGQIPDFDFSNFEAFNVSNNNLRGPIPDVEGIFKANSFYGNPNLCGKPISNSSCPPPPFRRPPPIVKKDRNKNAFIDDLLIYSGYIALGLIFIIFLIFKLLKKCKTKDKEKVLNHVEKKEMSQDPSFVVGGEKLSEILNSNGSKSWFNGLGIKSEYSMTSMESGVTTSGLVLLSSRKLRGLQFEDLLSAPAELIRRGKHGSLYKVMLDYGVLLAVKRIKDWGISKHEFERRMNLIAQVKHPLVMSPVAYYCSQQEKLLAYEYLPNGSLFMLLYGSHSGHSLDWRSRLDVAVKIAESLAYMHAELGDSGIAHGNLKSSNILFDKNMNPQISEYGLMMAENRGVISHRKSLGNRNMSPAATFRADIYAFGVILLELLTGKVVKNDGFDLVKWVNSVISEEWTAEVFDRSLISQGASEERMVNLLQVALKCINPSPNDRLSMSQVAVITNALKDEDDKSISFDT 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03876 644 SUPERFAMILY Protein kinase-like (PK-like) 375 626 IPR011009 -
Vivi3g03876 644 SUPERFAMILY L domain-like 30 228 - -
Vivi3g03876 644 Gene3D Phosphorylase Kinase; domain 1 343 445 - -
Vivi3g03876 644 Gene3D Ribonuclease Inhibitor 29 194 IPR032675 -
Vivi3g03876 644 Gene3D Transferase(Phosphotransferase) domain 1 446 643 - -
Vivi3g03876 644 FunFam Nuclear pore complex protein NUP107 29 189 - -
Vivi3g03876 644 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Vivi3g03876 644 PANTHER OS05G0588300 PROTEIN 14 632 - -
Vivi3g03876 644 Gene3D Ribonuclease Inhibitor 195 239 IPR032675 -
Vivi3g03876 644 Pfam Protein kinase domain 377 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03876 644 ProSiteProfiles Protein kinase domain profile. 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03876 Vivi-Chr3 66839205 66841768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03876 47 635 Receptor kinase-like Gene Family AT2G36570 34.414 3.23e-90 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi3g03876 Pkinase 5.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03876 - - pvu:PHAVU_009G180700g 810.831