Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03875 ATGGTGGATAATAACCTCTCCCCCTCGTCTTTCTCTTCAAACTTCAAAAATGAGTACTTAGAAAACATAGTCTCTCATACCACCACCACCAACAACAATGAAACATTGTTGATGCCACCGACATCATCTGCACAAACCTTCTCTAATGGGTATACGGATCTCCCTCAAGATCCAAGGGAGGAAACTACCAAATCCTCTTCCAAAAAACGTAAGGGTAGACCCCAGGGTTCTAGGAATAAACCTAAATCACGCATCATTATCAAGGAAAACAGAGAAGCTCTCACAGAAGTGGTTACGATTAAGATCTCTGTCGGAGAAGATATTATGGAGGCTCTAATTAACTATGCTATACGTCGTCAAACTGACATAGTAGTGTCGAGGGGTTTCGGTCTTGTCTGTAATGTTACACTTCTTGACCCGGTATCTTGTGTCCCATTATTACCCATCGAAGGACCATTACATATGACATCTTTATTTGGAACATATGTAAATCCTAATTTTGATTGCATTCCTCCTCAATTCATAGCTAATCCACCATGTTCATCTTTTACCATATATTTCTCTGGTATTAATGGACATGTGTTTGGCGGAGTTGTTGGTGGAAAAATTATTGCTGCTGGGGTTATTTTTATTAATGCCACTCTTGTCAAGAAAACTGCATTCCATAGAGCGGTTTCCATCAAGAGAAATGATCGAGAAATCGAAGAGGGTGGATCAATATTTGAAGATGGTGTCATCATGAATGTGGACCATGTAGCACACGAGTCTCACAACAACAACAACAATAACAATAACAACAATATTGTTTTTCACATGTTTACGAGCTTCAATAATGAGAGCGCTAATTCAACTCAACCAAATCATCAAATGTCCCATAACTATCTTCATACAGAAGAGAGTTCCATGCCGTGGAACCACTCCGCTCACAGTGAAAATTTCTAG 942 0.3949 MVDNNLSPSSFSSNFKNEYLENIVSHTTTTNNNETLLMPPTSSAQTFSNGYTDLPQDPREETTKSSSKKRKGRPQGSRNKPKSRIIIKENREALTEVVTIKISVGEDIMEALINYAIRRQTDIVVSRGFGLVCNVTLLDPVSCVPLLPIEGPLHMTSLFGTYVNPNFDCIPPQFIANPPCSSFTIYFSGINGHVFGGVVGGKIIAAGVIFINATLVKKTAFHRAVSIKRNDREIEEGGSIFEDGVIMNVDHVAHESHNNNNNNNNNNIVFHMFTSFNNESANSTQPNHQMSHNYLHTEESSMPWNHSAHSENF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03875 313 MobiDBLite consensus disorder prediction 30 85 - -
Vivi3g03875 313 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 224 - -
Vivi3g03875 313 ProSiteProfiles PPC domain profile profile. 91 237 IPR005175 -
Vivi3g03875 313 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 281 IPR014476 GO:0003680
Vivi3g03875 313 MobiDBLite consensus disorder prediction 30 56 - -
Vivi3g03875 313 Pfam Plants and Prokaryotes Conserved (PCC) domain 97 211 IPR005175 -
Vivi3g03875 313 Gene3D - 95 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03875 Vivi-Chr3 66813699 66814640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03875 68 223 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 28.931 5.05e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03875 - - vvo:131613388 327.02