Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi3g03872 | ATGTTGAAGTCCCTCAAACGTGGCGAATCGTCTCTTAAAGTGGATGTTTCTTCTTCATCTCCGTCTTCGTGGTCTGCTAAGTCTTTCACTAAGGACGGCCGAATAATTAGTGTTGGTGACTGTGCTCTCTTCAAACCATCACAAGATCGCCCACCTTTTATTGGAGTTATTCGTAGTTTGACACTTGGTAAAGAAAGTAAATTGAAGTTAAGTGTTAATTGGCTTTATCGGTCCATTGAAGTAAAACTCAGTAAAGCAGAGCCCTTGGAGGCTGCTCCCAACGAGATTTTCTACTCCCTTCATAAGAGTGAGATTGATGCTGAATTGCTAATCCATCCTTGTAAAGTTGCATTCCTTCCGAAAGGCGTCAAACTTCCAGCAGGGATTTCATCATTTGTGTGTAGGAGGGTTTATGACACATCAAACAAGTGTTTACGGTGGCTAGATGATCAAGAGTATCTTACTGAATGCCAAGAAGTACATAAGTTAGTATATAAGACTTGTGTAGAAATGAATGCAACAATTCAGCCAGGCGGTCGATCTCCTAAGCCAATGAGTAGCCCAACAACAACATCACAGGTGAAATCAGTTTCAGATAGTGTACAGAACAGTACTTCTTCCTTTCCTTCTCATGTTAAGGGGAGGAAAAGGGATAGGGTAGAGCAGGGCTCTGAGCCCATCAAGCGAGAACGTTCAATAAAAATTGAGGATGGACATTCTAGTAATTTTAGGCATGATAACATTTTGAAGACAGAGATATCCAAAATTACAGAAAAGGGAGGGCTTGTTGATGCTGAAGGAGTCGAAAAGTTTGTGCAGCTAATAGTCCGTGATAGAAATGAAAAGAAGATAGATTTAGCTAGCCGGTCATTGCTTGCAGCTGTTATTGCAGCAACCGATAGACTTGATTGTCTTAGTCAGTTTGTGCAGCAGAGGGGTTTACCTGTATTTGATGAATGGCTTCAAGAGGTCCATAAAGGAAAGAACGGGGATGGTGATAAATCTGTTGATGAATTTCTCTCGGTATTACTTCGGGCACTTGATAAGGTCCCAGTCAATCTACAGGCTCTAAAGATGTGCAACATCGGTAAATCTGTGAATCATTTGCGAACCCATAAAAACTTTGAAATTCAGAGGAAAGCAAGAGGTTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATTTAAAGGATGGAAAGTCTGGTTCTGGTCCCAGTTCCCCCTGTCCTGCCAAGTCACGGGTTGTTGATGTTGGTCAAGGTGGGAATAGACATTCAGGTGTGTCATCTGATATTGCCATGAAGAGTTCAGTCACACAAATTTCTACATCTAAAACTTCTTCCTTGAAGATTGTCCAGGGTGAGAACACACCTAAATCTGCATCAACATCTGCATTTCCACATGCAAAGTCAGTGCCTTCACCTGTATCTGCAATTACGAACTTAAAAGATGGACAGCCCCATGTTGCCGCTGTCAATGGCAGTTCTATTATTCCTATCGCCAATGCGAAGGATGAGAAAAGTAGTAGTTCTAGTCAATCTCACAACAACAGTCAATCTTACAACAACAGTCAATCTTGTTCTAGTGACCATGCTAGAACTGGGGGTCTTTCAGGAAAGGAGGATGCCAGAAGCTCTACTGCAATGAGTGCAAATAAGTTATCAGGCGGCTCTTCACGGCATCGGAAATCTATCAATGGACTCCTAGGTTCAACTTCATCCAAAGGGAAAAGGGAAAGTCGGTCAAGTAGGAAGTCTTCCTTGCACAAAAGTTTAACTTCAGAGAGAAGATCTCAGTCTGGATTAATTGAAAAAGCACTTGATAAAATTTCTCACGAAGGGAATACTCCCAAGCTAATTGTTAAAATTCCAAACCAAGGTAGAAGTCCTGCTCAAAGGGCCAGTGCTGGTTCTTTTGATGAACCTACAATCATGAATAGTAGAGTCGCTTCTCCTGTTCTTTCTGAGAAGCATGATCAGTTTGATCACGGTTTAAAGGAAAAGAGTGATTTTGATAGAGCCGATATTGGCTCTGATGTTAACACTGAATCTTGGCAGAGTAATGATTTTAAAGATATATTGACTGGCTCTGATGAAGGTGATGGATCCCCTGCTGCAGTTACTGATGAAGGCAATGGATCCCCTGCTGCAGTTACTCATGAAGAGCACTGTAGGACTGGCAATGATTGTAAGAAAACAGAGGAGGCATCAAAAATTGCTTCGTTGTCATCTGGGAACGGAAACAAAGCTGGAAATTTGCAGGATGCTTCTTACAGTTCCATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAAGCTGATGATATTGGAATGAATCTTCTTGCTAGTGTGGCGGCTGGAGAGATGTTGAAATCTGAATTATCGACTCCAACTGGGTCTCCAGACCGAAAAGCTACTGCTGTTGAACAGTTGTGCACAGGCCACTCTTCAGGTAAGTCCTCTGGAGTAAATGTTGTGCAGGATGAATGCCACTCAAATAATGGTCTTGATGCTGAAAATAAGCAACATGGTATATCTGGTGAGATGAATGTTGATGATGATTTTGATTGCCCGGCATCTGGAGGAAAGGCTGTAGGTGAGCTAGATAAGCCTGTTAATGCACGTAGTATGGATTTGCAGCAGGTTACAGAAACTATTCAAACTGGATTAGAAAGAAAAGGAATATCGATTGAAAAGCCTGTTCCTGCTTCATTGCGCGCACTTCCTGAATCGCAAGAAGCTATGGATGGTAATTGTAGTAAGCAGCTCCAGGAAGAGGTTGTTAGAGGAGTGGGTGCTGATGAAACTCTTGGTATTAAGATAAGTAGTGTTGGTGGAGTTGGGGTGGAAGCAGTTGACAAATTGTTACACGCATCTGTGGAAGTGGATGTAAATGGTGATCACGGTGCTGAACGATCAGGCAGCGACAGACTGATAACTCAAAAATCTCCCACTGTTAACAGACAATCCAATTCAGCTAGAGGAACAGACGACGGTGTACTCCTTTCTCGTGGTGTTGATAAGGTTCCTGAAGACTTCAATGAACGGGAGCATGGAAAAAACGGCGATATTGCGGCCAAGAACCATGCTAATGAGGCTAAAGTGCTAAGAACTGAGTGTGAACATGTTGTCTTGGCTATGCCTGCGAAAAGTGGTTTGTGTTCTAATGCAACTGATTTTGCTGCTGAGCGTGTGGAGGAAAATTCTGATATAAAAGAGGTTCATGACCAAGATACTGGACAGAGGCTTCACAAAGCTTCATCAAGCTTTCGTTCACAAGAAATGGATGAGCAACTGGATTCTAAAGGATCAAAACTGAATGCCATTGAAGCAGAAGAGGCTGAGGAGTGCACCTCTACCACAGCAGACGCTTCTTCCATGTCTGCTGTTGCTGTGTCAGATGCAGATGCAAAGGTTGAATTTGATTTAAATGAGGGGTTCGGTGCCGATGATGGAAAGCGTGGTGAGTTAAACAGCATTGCCACATCTGGATGTGCACCTTCTGTTCGATTGATCAGTCCTGTACCATTTTCTGCTTCATCTTTGTCTTATGGTATTCCTGCATCAATCACCGTGGCTGCTGCTGCAAAGGGACCCTTCATGCTGCCTGAGAATTTATTGAGAAGTAAAGGGGAAGTTGGTTGGAAGGGGTCAGCTGCTACTAGTGCATTCCGGCCAGCTGAGCCCAGGAAAGTTATGGAAACCCCTCTTGTTACACTAAACACACCTAATCTTGATACGGCCGCTGGAAAGAAGAGTCGACAACCATTAGATATTGACTTGAATGTTGCCGATGAAAGAATATTAGATGATATTTCTTCTCCATCTTGTGCTCGTTACATGAATATTGTATCTCTTGAAGCCAATGGTTACAATCCAGTATGCAGTAAGATGGCCTCACCTGTTCGGTGCTCTGGTGGTCTTGGACTTGACTTAAATCTAATGGATGAAGCCTCTGATATCGGTAATTGCTCCACAAGCAGTAGTTATAAGATAGATGTACCTCACATGCAGGTGAAATCATCATTGGGTGGCCGTTCAAATAGAGAAATGAGTGCCCACAGGGACTTTGATTTGAATAATGGACCTTCAGTTGATGAAATCACCACTGAACCATCGCTGCTCTCTCAGCATGCCAGGAGCAGTGTGCTAGCGCAACCATCTGTTTCGGGACTTAGATTGAGTACTGCCGAGCTAGGTAACTTTTCTTCATGGCTTCCTTCCAGTGGCAACACCTATTCTGCTGTCACGATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCCCCTAATGGATCACAAAGATTGCTGAGTCCTGCCACTAGCGGCAACCCATTTGGAACTGATATTTATAGGGGGCCAGTATTGCCATCTTCTCGTGCAATGGCATATCCATCTGCTCCATTTGAATACCCTGTTTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCATCGTCATTTTCTGCTGGATCGACTACCTTTGTGTATCCAACATCAGGCAGTCGACCTTGCTTCCCTGCGGTAAATTCACAGTTGATGGGGCCTGCCAGCACAGTTTCATCCCATTATCCCAGGCCTTATGCTGTTGGCCTTCCAGAAGGTAGCAGTAGTACTAGTGTTGAGACCAGTAGGAAATGGGCAAGACAGGGCTTAGATCTTAATGCTGGACCTGGAGGTTTAGACATAGAGGGGAGAGGAGATGAAATCTCATCTCTTGCATCAAGGCAACTCTCTGTTGCTAGTTTGCAGGTCCTAGCCGAGGAGCATGCAAGGATCCATCTGGCTGGTAGTGTCCTTAAGAGGAAGGAGCCTGATGGTGGGTGGGATGGCCACACCAAACATTCGTCATGGCAATAG | 4878 | 0.436 | MLKSLKRGESSLKVDVSSSSPSSWSAKSFTKDGRIISVGDCALFKPSQDRPPFIGVIRSLTLGKESKLKLSVNWLYRSIEVKLSKAEPLEAAPNEIFYSLHKSEIDAELLIHPCKVAFLPKGVKLPAGISSFVCRRVYDTSNKCLRWLDDQEYLTECQEVHKLVYKTCVEMNATIQPGGRSPKPMSSPTTTSQVKSVSDSVQNSTSSFPSHVKGRKRDRVEQGSEPIKRERSIKIEDGHSSNFRHDNILKTEISKITEKGGLVDAEGVEKFVQLIVRDRNEKKIDLASRSLLAAVIAATDRLDCLSQFVQQRGLPVFDEWLQEVHKGKNGDGDKSVDEFLSVLLRALDKVPVNLQALKMCNIGKSVNHLRTHKNFEIQRKARGLVDTWKKRVEAEMNLKDGKSGSGPSSPCPAKSRVVDVGQGGNRHSGVSSDIAMKSSVTQISTSKTSSLKIVQGENTPKSASTSAFPHAKSVPSPVSAITNLKDGQPHVAAVNGSSIIPIANAKDEKSSSSSQSHNNSQSYNNSQSCSSDHARTGGLSGKEDARSSTAMSANKLSGGSSRHRKSINGLLGSTSSKGKRESRSSRKSSLHKSLTSERRSQSGLIEKALDKISHEGNTPKLIVKIPNQGRSPAQRASAGSFDEPTIMNSRVASPVLSEKHDQFDHGLKEKSDFDRADIGSDVNTESWQSNDFKDILTGSDEGDGSPAAVTDEGNGSPAAVTHEEHCRTGNDCKKTEEASKIASLSSGNGNKAGNLQDASYSSINALIEGVKYSEADDIGMNLLASVAAGEMLKSELSTPTGSPDRKATAVEQLCTGHSSGKSSGVNVVQDECHSNNGLDAENKQHGISGEMNVDDDFDCPASGGKAVGELDKPVNARSMDLQQVTETIQTGLERKGISIEKPVPASLRALPESQEAMDGNCSKQLQEEVVRGVGADETLGIKISSVGGVGVEAVDKLLHASVEVDVNGDHGAERSGSDRLITQKSPTVNRQSNSARGTDDGVLLSRGVDKVPEDFNEREHGKNGDIAAKNHANEAKVLRTECEHVVLAMPAKSGLCSNATDFAAERVEENSDIKEVHDQDTGQRLHKASSSFRSQEMDEQLDSKGSKLNAIEAEEAEECTSTTADASSMSAVAVSDADAKVEFDLNEGFGADDGKRGELNSIATSGCAPSVRLISPVPFSASSLSYGIPASITVAAAAKGPFMLPENLLRSKGEVGWKGSAATSAFRPAEPRKVMETPLVTLNTPNLDTAAGKKSRQPLDIDLNVADERILDDISSPSCARYMNIVSLEANGYNPVCSKMASPVRCSGGLGLDLNLMDEASDIGNCSTSSSYKIDVPHMQVKSSLGGRSNREMSAHRDFDLNNGPSVDEITTEPSLLSQHARSSVLAQPSVSGLRLSTAELGNFSSWLPSSGNTYSAVTISSIMPDRGDQPFSIVAPNGSQRLLSPATSGNPFGTDIYRGPVLPSSRAMAYPSAPFEYPVFPFNSSFPLPSSSFSAGSTTFVYPTSGSRPCFPAVNSQLMGPASTVSSHYPRPYAVGLPEGSSSTSVETSRKWARQGLDLNAGPGGLDIEGRGDEISSLASRQLSVASLQVLAEEHARIHLAGSVLKRKEPDGGWDGHTKHSSWQ | 1625 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 968 | 1005 | - | - | |
| Vivi3g03872 | 1625 | Pfam | BAH domain | 36 | 145 | IPR001025 | GO:0003682 | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 175 | 236 | - | - | |
| Vivi3g03872 | 1625 | ProSiteProfiles | BAH domain profile. | 34 | 149 | IPR001025 | GO:0003682 | |
| Vivi3g03872 | 1625 | SMART | TFS2_5 | 321 | 394 | IPR003617 | GO:0005634 | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 211 | 236 | - | - | |
| Vivi3g03872 | 1625 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 268 | 396 | IPR035441 | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 445 | 476 | - | - | |
| Vivi3g03872 | 1625 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 303 | 407 | IPR035441 | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 505 | 602 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 579 | 594 | - | - | |
| Vivi3g03872 | 1625 | ProSiteProfiles | TFIIS N-terminal domain profile. | 322 | 395 | IPR017923 | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 659 | 733 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 659 | 679 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 1069 | 1104 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 681 | 695 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 978 | 999 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 1069 | 1084 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 505 | 535 | - | - | |
| Vivi3g03872 | 1625 | Pfam | TFIIS helical bundle-like domain | 343 | 392 | IPR017923 | - | |
| Vivi3g03872 | 1625 | Gene3D | - | 23 | 258 | IPR043151 | - | |
| Vivi3g03872 | 1625 | CDD | TFIIS_I | 326 | 393 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 542 | 578 | - | - | |
| Vivi3g03872 | 1625 | SMART | BAH_4 | 34 | 149 | IPR001025 | GO:0003682 | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 11 | 27 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 619 | 646 | - | - | |
| Vivi3g03872 | 1625 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 12 | 1625 | - | - | |
| Vivi3g03872 | 1625 | MobiDBLite | consensus disorder prediction | 179 | 210 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi3g03872 | Vivi-Chr3 | 66741513 | 66750766 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | IWS1 | Vivi3g03872 | BAH | 4.3e-09 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi3g03872 | - | - | ccaj:109810746 | 2119.35 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vivi2g04571 | 2 | 161531957 | 161539331 | Vivi3g03872 | 3 | 66741513 | 66750766 | ECH | |
| Vivi3g03872 | 3 | 66741513 | 66750766 | Vivi3g03872 | 3 | 66741513 | 66750766 | ECH |