Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03847 ATGTCACCTCCTATAGCAATGGCTGTTGTTGCTACAGCCATATCTATGCTATTCCTTTTTGGGATTTTCCTTTACTTTTACCACAAATTTTTTCTTGCTAGATACCAAAAAGTTTCTAGTAAAGGTAGTTTTGTTCATGAGGCAGATATAAAAAGATTTGGTGGTAATGTGAAAGGAGTAATTGCTGATGAAAATGGTGTTGATGTTATTTATATGATGGATAAAGAAAGTAGACAAATGATAACTAGTTTTCCAAATTGTATGTTTAATCCTAGTTATGAAGATGATGTAGAAAAAGAGAAGATTATAGATGTTTTGGTTCATAGGTCTAAAATATCTAACCCTCATCATGAGATTCCATTTTCATGTGAATCTCAACTACAAAAAACCTCACCAATGAATCTTGAGATGAATAAGATTCACATGAGTTACAATCAACCATTACCATCTCCTCCTTCTTCTCCGCCTGTGCCTCCGCCTCCTCCACCGCCGGCTCCTCCAAAGAAAGTAATTCCAAAGGGACTACTTCCACCTGGTCCACCTCCACTTCCAAAGGCTAGTGGCTTTTCATTCATGAAACCACCACCAGCACCTAAAGGAAAAGCAAACATGAGAGAGGGTGTGATAGGAGAGAGTTCAAGAGAGAAAGGTGGTGGACAAACCAGGCTTAAGCCTCTACATTGGGATAAGGTTATAGCTGATGTTGATCATTCAACTGTGTGGGATCAGATCAATGATGGATCTTTTAGGTTTGATGATGAACTCATGGAATCACTCTTTGGATATTCAACCAGATACCAAACTCAAGAAAGAAACATGTCTCTTTCCAATCTGGCAAAGACCAGTTCCAATACACCATCTCAAATATTCATCCTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTACTGAGATCACTAGCAGTTTCACGGCGCGAAATTCTTGACGCAGTACTTGATGGTCAAGAACTAAGCGTTGAGACACTCGAAAAACTCACTAAAATAGCTCCCTCTCCGGAAGAAGCATCCAAAATTGTCCAATTCAGCGGTAACCCGAATAACCTCGCAGAAGCCGAGTCTTTCCTATACTACATCCTTAAAGCAGTTCCAACATCATTCATCCGGTTAAAAGCAATGCTTTTCAAATCAAACTACGATAGCGAAATTCTTCAGCTTAAGGAACACTTACAAACACTTGACTTGGCTTGCAAGGAACTGAAAACTAGTAGCCTGTTTTTGAAACTCCTTGAAGCCATTCTCAAAACCGGTAACCGAATGAATGCAGGAACTTCAAGAGGCAACGCGCAAGGCTTCAACCTAAGCGCTCTTACGAAACTTTCTGATGTAAAAAGCACAAATGGTAAAACTAGTTTGCTTCACTTCATAGTGGAACAAGTAGCTCATTCAGAAGGGAAAAGACAAGCTATCTTTGAAAGTGAAAAAGAATATATAATTCTTGGTTTACCAGTGTTAGGTGAACTAAGTGATGAGTTATCCGAAGCGAAAAAAGCAGCTAACATCCACTATCAAACTTTCATAACCATGTGTTCAACTCTCATTTCTCATGTTACCGAAATTCGACACATAATAACATGTTGTGGAAACACTGAGAAAAGTGGATTCATCAATGAAATGAAAGGTTTCCTAGAGTTATGTGAGGAGGAACTTAAGGTTGTGAAAGAGGAACAAACAAGGATAATGGAACTTGTGAAGAAAACAAATGAGTACTATCTAGCAGGAGCATCTAAAGACAATAAGCCTAATCCTTTTCATTTGTTTGTTATTGTGAAAGATTTTGTTGACATGGTAGGTCAAACTTGCATTGAACTAAAAAAGAAAGTTGAAAAGAAGAATGTAGGAGTAGAGTTTGGATCAATAACACCACCTTTGTCTCCATCAAAGATGGTGCCACTGAGATTCTCTAACTTTGATTTGAATTTTACGTCAAATAGGTCAGATTCTACATTTTCCAGCCAATCAGAAGATGGTTTCTGA 1995 0.382 MSPPIAMAVVATAISMLFLFGIFLYFYHKFFLARYQKVSSKGSFVHEADIKRFGGNVKGVIADENGVDVIYMMDKESRQMITSFPNCMFNPSYEDDVEKEKIIDVLVHRSKISNPHHEIPFSCESQLQKTSPMNLEMNKIHMSYNQPLPSPPSSPPVPPPPPPPAPPKKVIPKGLLPPGPPPLPKASGFSFMKPPPAPKGKANMREGVIGESSREKGGGQTRLKPLHWDKVIADVDHSTVWDQINDGSFRFDDELMESLFGYSTRYQTQERNMSLSNLAKTSSNTPSQIFILEPRKSQNTAIVLRSLAVSRREILDAVLDGQELSVETLEKLTKIAPSPEEASKIVQFSGNPNNLAEAESFLYYILKAVPTSFIRLKAMLFKSNYDSEILQLKEHLQTLDLACKELKTSSLFLKLLEAILKTGNRMNAGTSRGNAQGFNLSALTKLSDVKSTNGKTSLLHFIVEQVAHSEGKRQAIFESEKEYIILGLPVLGELSDELSEAKKAANIHYQTFITMCSTLISHVTEIRHIITCCGNTEKSGFINEMKGFLELCEEELKVVKEEQTRIMELVKKTNEYYLAGASKDNKPNPFHLFVIVKDFVDMVGQTCIELKKKVEKKNVGVEFGSITPPLSPSKMVPLRFSNFDLNFTSNRSDSTFSSQSEDGF 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03847 664 SUPERFAMILY Formin homology 2 domain (FH2 domain) 158 617 - -
Vivi3g03847 664 MobiDBLite consensus disorder prediction 143 203 - -
Vivi3g03847 664 SMART it6_source 213 618 IPR015425 -
Vivi3g03847 664 ProSiteProfiles Formin homology-2 (FH2) domain profile. 213 629 IPR015425 -
Vivi3g03847 664 PANTHER FORMIN-RELATED 5 618 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vivi3g03847 664 MobiDBLite consensus disorder prediction 148 191 - -
Vivi3g03847 664 FunFam Formin-like protein 220 615 - -
Vivi3g03847 664 Gene3D Formin, FH2 domain 236 620 IPR042201 -
Vivi3g03847 664 Pfam Formin Homology 2 Domain 219 603 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03847 Vivi-Chr3 66145050 66147726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03847 5 662 FH2 protein (formin) Gene Family AT1G70140 41.413 9.07e-151 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03847 - - tpra:123885767 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03847 3 66145050 66147726 Vivi3g03847 3 66145050 66147726 ECH