Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03838 ATGATGATGATGTTTGATGAGATGGGTTTATCTGGTTATATGGATGTGTTTTCGGGTCCCCTAGTCGAGGGGGATGGTACCGCCCGGCAAACTGAGCCTGGGGTGATGATTGGCGAAGATTACAGTGATGATGAAATGGATATTGATGAGCTTGAGAAGAGGATGTGGAAGTACAAAATGCTTCACAAGCGGTTGAAGGATAAGGAACAAAGCAAGCCGAGGGAAGGGCTCGATGCGGCGAAGCAGAGGCAATCGCAGGAACAGGCAAGGAGGAAGAAGATGTCGAGGGCTCAAGATGGTATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGTAAGGCTCAAGGGTTTGTTTACGGGATAATTCCCGAGAAGGGGAAGCCTGTGACTGGGGCTTCGGATAATCTCCGGGAGTGGTGGAAGGATAAGGTTAGGTTTGATCGGAATGGTCCTGCTGCGATATCGAAGTACCTAGCAGACAATGCAATTCCGGGGAACAACGATGGGAGTAACTCAATTGGGCCAACCCCTCACACCTTGCAAGAGCTGCAGGACACAACTTTGGGTTCTCTGTTATCTGCACTGATGCAACACTGTGATCCCCCTCAGAGGCGGTATCCGTTGGAGAAGGGTGTTTCTCCTCCTTGGTGGCCAACTGGGAATGAAGAGTGGTGGCCTCATATCGGTTTACCGAAAGATCAAGGCCCTCCGCCTTACAAGAAGCCTCATGACCTGAAGAAGGCATGGAAGGTTGGTGTCCTGACTGCTGTCATCAAGCACATGTCTCCTGACATTGCCAAAATTCGCAAGCTTGTGAGACAGTCCAAATGCCTTCAAGACAAAATGACTGCTAAGGAAAGCGCAACGTGGCTTGCAATTGTCAATCAGGAGGAGGCTTTAGCGCGAGAGCTTTATCCTGATTATGTTCCCCCATTTACCTCAGCTGGAGGAAGTGGGTCTTTTTCCACCAATGATGGAAATGAGTACGATGTCGATGGAGGAGAAGATGACCAAAATTTCGACGTGGAGGAACGGAAACCTGAGAGTCTTCTTCATCCATCCAACATTGGGATGATGGAGAGAATGAGGGGCTTAAGACTTCCAATTCAGCAGCCCTCTTTCGCAATGAAGGGAGATGCTGCAACAAACATGGATTTCATGCGGAAGCGAAAGATCTCTGGTGACTTTAACATGATGATGGAACCAAAAATTTTCACTTGTGAACATCCTCCTTGTCCTTACAGCGAAGTTCGCCTCGCTTTTCAGGACAGGACTTCTAGGGACAATCATCAACTGTGCTGTCCCTATAGAGCCAGTTTATCAGATTATGGTGGTCCAAGTTTTCATGCTAACGAGGTTAAACCAGTCATATTCCCTCACTCCTTTGTTCAACAGAAACCTACAACTCAGTCTGTCAACATGGTTCCACCTTCAGTCGATCTTACCGGACTCGGAGTTACTGAAGACGGTGAGAAAAATATCGGCGACCTTATGACAGTCTATGATTCCGATATCCATCAAGGCAACCGGAATACTAACAATCGCGTAGCTGCTTCCGCTGCACAGAATCACAACTTACCGCATTCTGGCAGCATTCCTAGCAGCATTCAGCAGCAGCAGCAACAGCAGCATCAGAATTTCTACCGCGGTCAAGGAATGGTGATGGAAGGAACTAGCATGTCTAATAATAACCATCATCACATGTTTGCTAGAGGTGCAGGTCAATTTGACCGGTTTCGAGCTTTGAATTCTCCCTATGAGAACAATCACAATCACATTCAGAGTCACAATCACAACAACAACAGCAACAATAATTTCCAGTATATGTTTGGGTCCCCACAAATTGATCTGTCATCCTTTGATTTTAAGGAGGATAGTCATGGAACAGGCATGGATCCTATGCAGAAAGAGCAAGATATGTCAATATGGTACCATTGA 1938 0.4685 MMMMFDEMGLSGYMDVFSGPLVEGDGTARQTEPGVMIGEDYSDDEMDIDELEKRMWKYKMLHKRLKDKEQSKPREGLDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYLADNAIPGNNDGSNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVSPPWWPTGNEEWWPHIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARELYPDYVPPFTSAGGSGSFSTNDGNEYDVDGGEDDQNFDVEERKPESLLHPSNIGMMERMRGLRLPIQQPSFAMKGDAATNMDFMRKRKISGDFNMMMEPKIFTCEHPPCPYSEVRLAFQDRTSRDNHQLCCPYRASLSDYGGPSFHANEVKPVIFPHSFVQQKPTTQSVNMVPPSVDLTGLGVTEDGEKNIGDLMTVYDSDIHQGNRNTNNRVAASAAQNHNLPHSGSIPSSIQQQQQQQHQNFYRGQGMVMEGTSMSNNNHHHMFARGAGQFDRFRALNSPYENNHNHIQSHNHNNNSNNNFQYMFGSPQIDLSSFDFKEDSHGTGMDPMQKEQDMSIWYH 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03838 645 FunFam Ethylene insensitive 3-like 1 83 161 - -
Vivi3g03838 645 Pfam Ethylene insensitive 3 49 298 IPR047091 GO:0003700
Vivi3g03838 645 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Vivi3g03838 645 Gene3D - 175 308 IPR023278 GO:0003700|GO:0005634
Vivi3g03838 645 MobiDBLite consensus disorder prediction 316 341 - -
Vivi3g03838 645 SUPERFAMILY DNA-binding domain of EIN3-like 177 301 IPR023278 GO:0003700|GO:0005634
Vivi3g03838 645 FunFam Ethylene insensitive 3-like 1 171 308 - -
Vivi3g03838 645 MobiDBLite consensus disorder prediction 625 645 - -
Vivi3g03838 645 MobiDBLite consensus disorder prediction 67 94 - -
Vivi3g03838 645 Coils Coil 48 68 - -
Vivi3g03838 645 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 38 627 IPR006957 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03838 Vivi-Chr3 65862151 65864904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03838 3 644 EIL Transcription Factor Family AT3G20770 56.949 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vivi3g03838 EIN3 3.3e-127 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03838 K14514 - gmx:100775868 925.235