Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03814 ATGAGCAACTTTTCTGTTTCTGCTTCATCTTCATCATTGATGCTATCTCCCAAAAAATACGATGTTTTTCTTAGCTTTCGAGGCGAAGATACACGCGACAACATCACAAGCCATCTTTATGAAGCACTGGACCAAAAGAAAGTTGAAACCTATATAGACTACAAGCTAGAAAAAGGAGAGGGAATTGGACCAGCACTCATCACAGCCATTGAAGAGTCACATGTTTCTGTTGTCATCTTCTCGGAAAACTATGCTTCCTCCAAGTGGTGTTTGGATGAAATTGTGAAGATCATGGAGTGCAAGAAAGATCGAGGACAGATTGTGATACCTGTGTTCTACAAAATAGATCCATCACATGTGAGAAACCAGAGAGGAACATATGAGATTTGGTTTAAGAAACATGAGATAGATCTTGCGAGGAACAATAGTCCGAGGTTGTTCAATTGGAGAAGTGCTCTCACAGAAGCAGCAAATTTGTCTGGTTGGGACTTTCATACTTATAGTTCTGAATCTCAATTCATAAAAGACATTGTTAAAGATATTTTGCAACGACTGAATTTGGTACACCCAATTGATCCAATATTAAAGGGAGTTGTTGGAATAGAGGAAAACTACGAAGGAGTAAAATCATTATTGGAAATGGACTCAAAAGAAGTTCAAGTGATTGGGATATGGGGCATGGGTGGCATTGGAAAAACCACTCTAGCAATTGCTTTACATGCCAAACTCTCTTCTCAATTTGAAGGTCATTGTTTCTTAGCAAATGTTAGAGAAGAAACAGAAAAAAATAGTATCAATTTCATGCGCAACAAACTTTTTTCAGAGCTCTTAGAGGAAGAAAATCTCCATGTTAATGTACCTAAAGTTGAATATCGTCATGTTACCAATAGGCTTCGACGTAAGAAGGTTCTTATCGTGTTGGATGATGTTGCTAATTCTGAACAATTAGATGATTTGATCAGTGATTATGATTGGTTAGGACTTGGAAGTAGAGTGATTGTAACAACAAGAGATAAACATAGTATTAGCATTGTTGATAAAATTTATGAGATGAAGGAATTGAACAAACACAACTCTCTTGAGCTTTTTTGTTTGAATGCATTCAAAGCAAAGCATCCTAAAAGTGGATATGAAGAGCTTTCAAAAAATGTTGTTGCCAATTGCAAAGGTAACCCTTTGGCTTTAAAAGTGTTAGGTGCACGGTTTCGTTCAAGGAGTAAGGAAGTGTGGGAAAGTGAATTGGAAAAGCTTAAGAAGATTCCGGACATGAAAATTCAAAATGAGTTGAAATCGAGTTATGATGACTTGGATGATGATCAAAAGAATATATTTCTAGACATAGCATGCTTTGTCAAAGAAGAATCTAAAGATCGTATAACAAATTTGTTTAAAGCTTATAATTTTTTCCCAGATATCGGGATAAATGATCTTGTAGAAAAGTCTCTTGTAACCATTTCGAATAAGGGTACAATACAAATGCATGATTTAATACAAGAAATGGGTTGGAATATTGTTCATCAAGAATCTCCCAAAGATCCTGGAAGTAGAAGCCGATTGTGGAATCCAAACGAAGTGTATGATGTACTGAAATATAATAAGGGAACTAAAATTGTAGAAGGCATAACTTTAGATGTTTCTAAAATTGAGGATCTACATTTGAGCTCTGATTCCTTTACAAAAATGTCTGAAATGAGATATCTTAAATTCTATTATGGGAAGTGGAATGGAACATGTAACATATATCTTCCCAACGGTCTTGATTCATTGTCTGACAAATTGAGGTACCTTGAATGGCATAGATACTGTCTGAATTCTTTGCCATCAAAATTTAGAGCAAATTTGCTTGTAGAGCTTTGCATGCCTTTCAGCAAACTTCAAAAGCTTTGGGATGGAGTTCAGGATCTTGGGAATTTGAAGGAAATTGACCTTAGATTCAGCAAAGAGCTAGTTGAGGTTCCAGACTTGTCTAAGGCTAGGAATTTGGAATGGTTATCACTTTCTCAGTGTAGAAATTTACGCGAAATCCATCCCTCCATTTTATCACTCGACAAGCTTAAAGATCTCGAATTAGAAGGCTGTACGAAGATTGAAAGCCTAATTCAAATGGACAACAATCATTTAAAATCTCTCCAAAACATTCAACTTAGCAATTGCTCATCATTGAAAGAATTTTCATTCACTTCAAACAATCTCGAGAATTTGTGGTTAGATGGTACTTCTATCCGCGAACTGTCCTCGTCGATTTGGTGCTGCGAGAAACTGAAGATGATTGATCTACACAACTGTGACAATCTTGAGGGTTTTGGGGACGACATGCAAAACTATATCGGAATTGGATCTCTTAATACTATAGACCTTTCCGGGTGCAAAGGCCTGAATGCATCAAATCTTGGTTTCCACCTCAAATCATGGCAAGCAACTTTAAGATCACTGGATTTGGAAAATTGTTGCAACTTAGAGACACTCCCTGATAGCATTGGTTTATTATCATCATTACAATGCTTAAAACTGAGCGGAAGCAATGTCGAGAGTCTGTCACCAAACATCAAAAACCTTAACAACCTTAAAGAGCTAAGGTTGGACAACTGCAAGAAACTAGTGTATGTCCCGGAGCTTCCTTCGTCGCTGCGATTATTTAGTGCTATCAACTGCATTTCTCTAATCACAGACCTTACTACGTTGGACATAGCCTTTGAACATAGACCTAAACGTCAACCGTATCCTCAGGTCAAATGA 2736 0.3695 MSNFSVSASSSSLMLSPKKYDVFLSFRGEDTRDNITSHLYEALDQKKVETYIDYKLEKGEGIGPALITAIEESHVSVVIFSENYASSKWCLDEIVKIMECKKDRGQIVIPVFYKIDPSHVRNQRGTYEIWFKKHEIDLARNNSPRLFNWRSALTEAANLSGWDFHTYSSESQFIKDIVKDILQRLNLVHPIDPILKGVVGIEENYEGVKSLLEMDSKEVQVIGIWGMGGIGKTTLAIALHAKLSSQFEGHCFLANVREETEKNSINFMRNKLFSELLEEENLHVNVPKVEYRHVTNRLRRKKVLIVLDDVANSEQLDDLISDYDWLGLGSRVIVTTRDKHSISIVDKIYEMKELNKHNSLELFCLNAFKAKHPKSGYEELSKNVVANCKGNPLALKVLGARFRSRSKEVWESELEKLKKIPDMKIQNELKSSYDDLDDDQKNIFLDIACFVKEESKDRITNLFKAYNFFPDIGINDLVEKSLVTISNKGTIQMHDLIQEMGWNIVHQESPKDPGSRSRLWNPNEVYDVLKYNKGTKIVEGITLDVSKIEDLHLSSDSFTKMSEMRYLKFYYGKWNGTCNIYLPNGLDSLSDKLRYLEWHRYCLNSLPSKFRANLLVELCMPFSKLQKLWDGVQDLGNLKEIDLRFSKELVEVPDLSKARNLEWLSLSQCRNLREIHPSILSLDKLKDLELEGCTKIESLIQMDNNHLKSLQNIQLSNCSSLKEFSFTSNNLENLWLDGTSIRELSSSIWCCEKLKMIDLHNCDNLEGFGDDMQNYIGIGSLNTIDLSGCKGLNASNLGFHLKSWQATLRSLDLENCCNLETLPDSIGLLSSLQCLKLSGSNVESLSPNIKNLNNLKELRLDNCKKLVYVPELPSSLRLFSAINCISLITDLTTLDIAFEHRPKRQPYPQVK 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03814 911 Gene3D - 433 501 IPR036388 -
Vivi3g03814 911 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Vivi3g03814 911 Pfam Leucine Rich Repeat 615 633 IPR011713 -
Vivi3g03814 911 SMART till_3 19 159 IPR000157 GO:0007165
Vivi3g03814 911 PRINTS Disease resistance protein signature 297 311 - -
Vivi3g03814 911 PRINTS Disease resistance protein signature 705 721 - -
Vivi3g03814 911 PRINTS Disease resistance protein signature 221 236 - -
Vivi3g03814 911 PRINTS Disease resistance protein signature 388 402 - -
Vivi3g03814 911 Pfam TIR domain 19 192 IPR000157 GO:0007165
Vivi3g03814 911 Pfam NB-ARC domain 209 434 IPR002182 GO:0043531
Vivi3g03814 911 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 162 IPR035897 -
Vivi3g03814 911 SUPERFAMILY L domain-like 492 883 - -
Vivi3g03814 911 Gene3D Ribonuclease Inhibitor 728 899 IPR032675 -
Vivi3g03814 911 Gene3D Ribonuclease Inhibitor 516 727 IPR032675 -
Vivi3g03814 911 Gene3D - 17 185 IPR035897 -
Vivi3g03814 911 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 187 - -
Vivi3g03814 911 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 447 IPR027417 -
Vivi3g03814 911 Gene3D - 353 432 IPR042197 -
Vivi3g03814 911 Gene3D - 186 350 IPR027417 -
Vivi3g03814 911 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 725 IPR044974 GO:0006952
Vivi3g03814 911 FunFam Disease resistance protein RPS4 535 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03814 Vivi-Chr3 65363298 65372510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03814 16 858 WRKY Transcription Factor Family AT4G12020 31.265 5.35e-109 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03814 - - psat:127083514 1650.57