Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03813 ATGAGCAACTTTTCTGTTTCTGCTTCATCTTCATCATTGATGCTATCTCCCAAAAAATACGATGTTTTTCTTAGCTTTCGAGGCGAAGATACACGCGACAACATCACAAGCCATCTTTATGAAGCACTGGACCAAAAGAAAGTTGAAACCTATATAGACTACAAGCTAGAAAAAGGAGAGGGAATTGGACCAGCACTCATCACAGCCATTGAAGAGTCACATGTTTCTGTTGTCATCTTCTCGGAAAACTATGCTTCCTCCAAGTGGTGTTTGGATGAAATTGTGAAGATCATGGAGTGCAAGAAAGATCGAGGACAGATTGTGATACCTGTGTTCTACAAAATAGATCCATCACATGTGAGAAACCAGAGAGGAACATATGAGATTTGGTTTAAGAAACATGAGATAGATCTTGCGAGGAACAATAGTCCGAGGTTGTTCAATTGGAGAAGTGCTCTCACAGAAGCAGCAAATTTGTCTGGTTGGGACTTTCATACTTATAGTTCTGAATCTCAATTCATAAAAGACATTGTTAAAGATATTTTGCAACGACTGAATTTGGTACACCCAATTGATCCAATATTAAAGGGAGTTGTTGGAATAGAGGAAAACTACGAAGGAGTAAAATCATTATTGGAAATGGACTCAAAAGAAGTTCAAGTGATTGGGATATGGGGCATGGGTGGCATTGGAAAAACCACTCTAGCAATTGCTTTACATGCCAAACTCTCTTCTCAATTTGAAGGTCATTGTTTCTTAGCAAATGTTAGAGAAGAAACAGAAAAAAATAGTATCAATTTCATGCGCAACAAACTTTTTTCAGAGCTCTTAGAGGAAGAAAATCTCCATGTTAATGTACCTAAAGTTGAATATCGTCATGTTACCAATAGGCTTCGACGTAAGAAGGTTCTTATCGTGTTGGATGATGTTGCTAATTCTGAACAATTAGATGATTTGATCAGTGATTATGATTGGTTAGGACTTGGAAGTAGAGTGATTGTAACAACAAGAGATAAACATAGTATTAGCATTGTTGATAAAATTTATGAGATGAAGGAATTGAACAAACACAACTCTCTTGAGCTTTTTTGTTTGAATGCATTCAAAGCAAAGCATCCTAAAAGTGGATATGAAGAGCTTTCAAAAAATGTTGTTGCCAATTGCAAAGGTAACCCTTTGGCTTTAAAAGTGTTAGGTGCACGGTTTCGTTCAAGGAGTAAGGAAGTGTGGGAAAGTGAATTGGAAAAGCTTAAGAAGATTCCGGACATGAAAATTCAAAATGAGTTGAAATCGAGTTATGATGACTTGGATGATGATCAAAAGAATATATTTCTAGACATAGCATGCTTTGTCAAAGAAGAATCTAAAGATCGTATAACAAATTTGTTTAAAGCTTATAATTTTTTCCCAGATATCGGGATAAATGATCTTGTAGAAAAGTCTCTTGTAACCATTTCGAATAAGGGTACAATACAAATGCATGATTTAATACAAGAAATGGGTTGGAATATTGTTCATCAAGAATCTCCCAAAGATCCTGGAAGTAGAAGCCGATTGTGGAATCCAAACGAAGTGTATGATGTACTGAAATATAATAAGGGAACTAAAATTGTAGAAGGCATAACTTTAGATGTTTCTAAAATTGAGGATCTACATTTGAGCTCTGATTCCTTTACAAAAATGTCTGAAATGAGATATCTTAAATTCTATTATGGGAAGTGGAATGGAACATGTAACATATATCTTCCCAACGGTCTTGATTCATTGTCTGACAAATTGAGGTACCTTGAATGGCATAGATACTGTCTGAATTCTTTGCCATCAAAATTTAGAGCAAATTTGCTTGTAGAGCTTTGCATGCCTTTCAGCAAACTTCAAAAGCTTTGGGATGGAGTTCAGGATCTTGGGAATTTGAAGGAAATTGACCTTAGATTCAGCAAAGAGCTAGTTGAGGTTCCAGACTTGTCTAAGGCTAGGAATTTGGAATGGTTATCACTTTCTCAGTGTAGAAATTTACGCGAAATCCATCCCTCCATTTTATCACTCGACAAGCTTAAAGATCTCGAATTAGAAGGCTGTACGAAGATTGAAAGCCTAATTCAAATGGACAACAATCATTTAAAATCTCTCCAAAACATTCAACTTAGCAATTGCTCATCATTGAAAGAATTTTCATTCACTTCAAACAATCTCGAGAATTTGTGGTTAGATGGTACTTCTATCCGCGAACTGTCCTCGTCGATTTGGTGCTGCGAGAAACTGAAGATGATTGATCTACACAACTGTGACAATCTTGAGGGTTTTGGGGACGACATGCAAAACTATATCGGAATTGGATCTCTTAATACTATAGACCTTTCCGGGTGCAAAGGCCTGAATGCATCAAATCTTGGTTTCCACCTCAAATCATGGCAAGCAACTTTAAGATCACTGGATTTGGAAAATTGTTGCAACTTAGAGACACTCCCTGATAGCATTGGTTTATTATCATCATTACAATGCTTAAAACTGAGCGGAAGCAATGTCGAGAGTCTGTCACCAAACATCAAAAACCTTAACAACCTTAAAGAGCTAAGGTTGGACAACTGCAAGAAACTAGTGTATGTCCCGGAGCTTCCTTCGTCGCTGCGATTATTTAGTGCTATCAACTGCATTTCTCTAATCACAGACCTTACTACGTTGGACATAGCCTTTGAACATAGACCTAAACGTCAACCGTATCCTCAGTCAGTGTTCTTCCCTAGTGCTCATGTTCCTAAGAGATTTAGCTATCAGGGTTCAACTTCTGAAGTAACTATTAAGCATCTTCCAGAATCTGGTTTATATGGTTTAGTTTTTTGTCTTGTTCTTGCAGGGTCAAATGATAAGTATGGAGTGGTTCAATTTTCTGTTAACCAAAACTCCAAAAACATAGGCGGAAAAGCTACCTCATTGGGTGATCTGCATCTTGTTATGGATCATGTGTTTCTTTGGTATTGTGACATTGGGACTAGAGCTAAATACATTTCTTTGTATAGTCAAATACAAGAAAGTGGAGCATGGGATAATCCTTATGATATATCATTTCATTTTTCGCTTGAAAATGAGGAGGGAGAATGGTCAGCAAAGAGGATAAGAGGGTGTGGAGTCTTACCACTTTATCACTTACAAGAATCTTTGGATACCAACAACTTGCCCCTCGAACCCGAACTTGAGCTCGATTCTTGCGATCTAATTTCCGAGCTAGAAAGTTTGTTATGTGATAGTTATATGCTTTCTCCTATGTGCACTGACTCAACCACTCTTTCAATACTTCTTGAAAATTTAGAGACCCTTTTGGAGACACCACTTGAAATTCTCTCTTCAGACAATGAAGTGAAGCAAAAGTTCTATCAAATTTTGGAACAACTTGGCCAATTTGAAAACCAAATCCCTGTTAAGCTTCATCATGTTATTTGCAAGCTAAGAACTTTCATTGAAGGGGTTGATGTAAGATTTGTGAGTGCTCAAAAAACTATCCAAGATTATAATCAGCTGCTTCAATCAAGGACTGATATATCAAAGCAATTGATAAGTGTCAAAGCCCGAGAATACCAAAATAAATCCGAAATGTCTCGTGGTAAGATAGAATTTGAAAGGATCAATTCTGAGATTTTTGAACTAGAACAGAAGTTAAGTGGTCTTGTTGAGATTAGAGACAAGTTGAAGAGAAAGTTGGATCATTGTGATGTGATAGATAAAAACCTTAAGACAGAAGTTACACAATGCAAGACTGTGTTACTAAATCTGAAAAAGTCTGAGGTTTCTTACAAAGAGGCCTTAACTAATAAGAAGAAAGTTGAAGATGAATGGACTGATATGAAAAAGAACTTTGCTACCAATAAGAATGTTTGA 3873 0.3669 MSNFSVSASSSSLMLSPKKYDVFLSFRGEDTRDNITSHLYEALDQKKVETYIDYKLEKGEGIGPALITAIEESHVSVVIFSENYASSKWCLDEIVKIMECKKDRGQIVIPVFYKIDPSHVRNQRGTYEIWFKKHEIDLARNNSPRLFNWRSALTEAANLSGWDFHTYSSESQFIKDIVKDILQRLNLVHPIDPILKGVVGIEENYEGVKSLLEMDSKEVQVIGIWGMGGIGKTTLAIALHAKLSSQFEGHCFLANVREETEKNSINFMRNKLFSELLEEENLHVNVPKVEYRHVTNRLRRKKVLIVLDDVANSEQLDDLISDYDWLGLGSRVIVTTRDKHSISIVDKIYEMKELNKHNSLELFCLNAFKAKHPKSGYEELSKNVVANCKGNPLALKVLGARFRSRSKEVWESELEKLKKIPDMKIQNELKSSYDDLDDDQKNIFLDIACFVKEESKDRITNLFKAYNFFPDIGINDLVEKSLVTISNKGTIQMHDLIQEMGWNIVHQESPKDPGSRSRLWNPNEVYDVLKYNKGTKIVEGITLDVSKIEDLHLSSDSFTKMSEMRYLKFYYGKWNGTCNIYLPNGLDSLSDKLRYLEWHRYCLNSLPSKFRANLLVELCMPFSKLQKLWDGVQDLGNLKEIDLRFSKELVEVPDLSKARNLEWLSLSQCRNLREIHPSILSLDKLKDLELEGCTKIESLIQMDNNHLKSLQNIQLSNCSSLKEFSFTSNNLENLWLDGTSIRELSSSIWCCEKLKMIDLHNCDNLEGFGDDMQNYIGIGSLNTIDLSGCKGLNASNLGFHLKSWQATLRSLDLENCCNLETLPDSIGLLSSLQCLKLSGSNVESLSPNIKNLNNLKELRLDNCKKLVYVPELPSSLRLFSAINCISLITDLTTLDIAFEHRPKRQPYPQSVFFPSAHVPKRFSYQGSTSEVTIKHLPESGLYGLVFCLVLAGSNDKYGVVQFSVNQNSKNIGGKATSLGDLHLVMDHVFLWYCDIGTRAKYISLYSQIQESGAWDNPYDISFHFSLENEEGEWSAKRIRGCGVLPLYHLQESLDTNNLPLEPELELDSCDLISELESLLCDSYMLSPMCTDSTTLSILLENLETLLETPLEILSSDNEVKQKFYQILEQLGQFENQIPVKLHHVICKLRTFIEGVDVRFVSAQKTIQDYNQLLQSRTDISKQLISVKAREYQNKSEMSRGKIEFERINSEIFELEQKLSGLVEIRDKLKRKLDHCDVIDKNLKTEVTQCKTVLLNLKKSEVSYKEALTNKKKVEDEWTDMKKNFATNKNV 1290
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03813 1290 Pfam Leucine Rich Repeat 615 633 IPR011713 -
Vivi3g03813 1290 SUPERFAMILY L domain-like 492 884 - -
Vivi3g03813 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 447 IPR027417 -
Vivi3g03813 1290 Coils Coil 1211 1231 - -
Vivi3g03813 1290 Gene3D - 433 501 IPR036388 -
Vivi3g03813 1290 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Vivi3g03813 1290 SMART till_3 19 159 IPR000157 GO:0007165
Vivi3g03813 1290 Gene3D - 187 350 IPR027417 -
Vivi3g03813 1290 Gene3D - 17 186 IPR035897 -
Vivi3g03813 1290 PRINTS Disease resistance protein signature 221 236 - -
Vivi3g03813 1290 PRINTS Disease resistance protein signature 705 721 - -
Vivi3g03813 1290 PRINTS Disease resistance protein signature 388 402 - -
Vivi3g03813 1290 PRINTS Disease resistance protein signature 297 311 - -
Vivi3g03813 1290 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 162 IPR035897 -
Vivi3g03813 1290 Pfam TIR domain 19 192 IPR000157 GO:0007165
Vivi3g03813 1290 FunFam Disease resistance protein RPS4 535 729 - -
Vivi3g03813 1290 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 187 - -
Vivi3g03813 1290 Gene3D - 353 432 IPR042197 -
Vivi3g03813 1290 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 725 IPR044974 GO:0006952
Vivi3g03813 1290 Coils Coil 1256 1276 - -
Vivi3g03813 1290 Gene3D Ribonuclease Inhibitor 516 727 IPR032675 -
Vivi3g03813 1290 Gene3D Ribonuclease Inhibitor 728 900 IPR032675 -
Vivi3g03813 1290 Pfam NB-ARC domain 209 434 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi3g03813 Vivi-Chr3 65363298 65373538 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03813 16 858 WRKY Transcription Factor Family AT4G12020 31.265 4.43e-106 368
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03813 - - psat:127083514 2277.67