Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi3g03813 | ATGAGCAACTTTTCTGTTTCTGCTTCATCTTCATCATTGATGCTATCTCCCAAAAAATACGATGTTTTTCTTAGCTTTCGAGGCGAAGATACACGCGACAACATCACAAGCCATCTTTATGAAGCACTGGACCAAAAGAAAGTTGAAACCTATATAGACTACAAGCTAGAAAAAGGAGAGGGAATTGGACCAGCACTCATCACAGCCATTGAAGAGTCACATGTTTCTGTTGTCATCTTCTCGGAAAACTATGCTTCCTCCAAGTGGTGTTTGGATGAAATTGTGAAGATCATGGAGTGCAAGAAAGATCGAGGACAGATTGTGATACCTGTGTTCTACAAAATAGATCCATCACATGTGAGAAACCAGAGAGGAACATATGAGATTTGGTTTAAGAAACATGAGATAGATCTTGCGAGGAACAATAGTCCGAGGTTGTTCAATTGGAGAAGTGCTCTCACAGAAGCAGCAAATTTGTCTGGTTGGGACTTTCATACTTATAGTTCTGAATCTCAATTCATAAAAGACATTGTTAAAGATATTTTGCAACGACTGAATTTGGTACACCCAATTGATCCAATATTAAAGGGAGTTGTTGGAATAGAGGAAAACTACGAAGGAGTAAAATCATTATTGGAAATGGACTCAAAAGAAGTTCAAGTGATTGGGATATGGGGCATGGGTGGCATTGGAAAAACCACTCTAGCAATTGCTTTACATGCCAAACTCTCTTCTCAATTTGAAGGTCATTGTTTCTTAGCAAATGTTAGAGAAGAAACAGAAAAAAATAGTATCAATTTCATGCGCAACAAACTTTTTTCAGAGCTCTTAGAGGAAGAAAATCTCCATGTTAATGTACCTAAAGTTGAATATCGTCATGTTACCAATAGGCTTCGACGTAAGAAGGTTCTTATCGTGTTGGATGATGTTGCTAATTCTGAACAATTAGATGATTTGATCAGTGATTATGATTGGTTAGGACTTGGAAGTAGAGTGATTGTAACAACAAGAGATAAACATAGTATTAGCATTGTTGATAAAATTTATGAGATGAAGGAATTGAACAAACACAACTCTCTTGAGCTTTTTTGTTTGAATGCATTCAAAGCAAAGCATCCTAAAAGTGGATATGAAGAGCTTTCAAAAAATGTTGTTGCCAATTGCAAAGGTAACCCTTTGGCTTTAAAAGTGTTAGGTGCACGGTTTCGTTCAAGGAGTAAGGAAGTGTGGGAAAGTGAATTGGAAAAGCTTAAGAAGATTCCGGACATGAAAATTCAAAATGAGTTGAAATCGAGTTATGATGACTTGGATGATGATCAAAAGAATATATTTCTAGACATAGCATGCTTTGTCAAAGAAGAATCTAAAGATCGTATAACAAATTTGTTTAAAGCTTATAATTTTTTCCCAGATATCGGGATAAATGATCTTGTAGAAAAGTCTCTTGTAACCATTTCGAATAAGGGTACAATACAAATGCATGATTTAATACAAGAAATGGGTTGGAATATTGTTCATCAAGAATCTCCCAAAGATCCTGGAAGTAGAAGCCGATTGTGGAATCCAAACGAAGTGTATGATGTACTGAAATATAATAAGGGAACTAAAATTGTAGAAGGCATAACTTTAGATGTTTCTAAAATTGAGGATCTACATTTGAGCTCTGATTCCTTTACAAAAATGTCTGAAATGAGATATCTTAAATTCTATTATGGGAAGTGGAATGGAACATGTAACATATATCTTCCCAACGGTCTTGATTCATTGTCTGACAAATTGAGGTACCTTGAATGGCATAGATACTGTCTGAATTCTTTGCCATCAAAATTTAGAGCAAATTTGCTTGTAGAGCTTTGCATGCCTTTCAGCAAACTTCAAAAGCTTTGGGATGGAGTTCAGGATCTTGGGAATTTGAAGGAAATTGACCTTAGATTCAGCAAAGAGCTAGTTGAGGTTCCAGACTTGTCTAAGGCTAGGAATTTGGAATGGTTATCACTTTCTCAGTGTAGAAATTTACGCGAAATCCATCCCTCCATTTTATCACTCGACAAGCTTAAAGATCTCGAATTAGAAGGCTGTACGAAGATTGAAAGCCTAATTCAAATGGACAACAATCATTTAAAATCTCTCCAAAACATTCAACTTAGCAATTGCTCATCATTGAAAGAATTTTCATTCACTTCAAACAATCTCGAGAATTTGTGGTTAGATGGTACTTCTATCCGCGAACTGTCCTCGTCGATTTGGTGCTGCGAGAAACTGAAGATGATTGATCTACACAACTGTGACAATCTTGAGGGTTTTGGGGACGACATGCAAAACTATATCGGAATTGGATCTCTTAATACTATAGACCTTTCCGGGTGCAAAGGCCTGAATGCATCAAATCTTGGTTTCCACCTCAAATCATGGCAAGCAACTTTAAGATCACTGGATTTGGAAAATTGTTGCAACTTAGAGACACTCCCTGATAGCATTGGTTTATTATCATCATTACAATGCTTAAAACTGAGCGGAAGCAATGTCGAGAGTCTGTCACCAAACATCAAAAACCTTAACAACCTTAAAGAGCTAAGGTTGGACAACTGCAAGAAACTAGTGTATGTCCCGGAGCTTCCTTCGTCGCTGCGATTATTTAGTGCTATCAACTGCATTTCTCTAATCACAGACCTTACTACGTTGGACATAGCCTTTGAACATAGACCTAAACGTCAACCGTATCCTCAGTCAGTGTTCTTCCCTAGTGCTCATGTTCCTAAGAGATTTAGCTATCAGGGTTCAACTTCTGAAGTAACTATTAAGCATCTTCCAGAATCTGGTTTATATGGTTTAGTTTTTTGTCTTGTTCTTGCAGGGTCAAATGATAAGTATGGAGTGGTTCAATTTTCTGTTAACCAAAACTCCAAAAACATAGGCGGAAAAGCTACCTCATTGGGTGATCTGCATCTTGTTATGGATCATGTGTTTCTTTGGTATTGTGACATTGGGACTAGAGCTAAATACATTTCTTTGTATAGTCAAATACAAGAAAGTGGAGCATGGGATAATCCTTATGATATATCATTTCATTTTTCGCTTGAAAATGAGGAGGGAGAATGGTCAGCAAAGAGGATAAGAGGGTGTGGAGTCTTACCACTTTATCACTTACAAGAATCTTTGGATACCAACAACTTGCCCCTCGAACCCGAACTTGAGCTCGATTCTTGCGATCTAATTTCCGAGCTAGAAAGTTTGTTATGTGATAGTTATATGCTTTCTCCTATGTGCACTGACTCAACCACTCTTTCAATACTTCTTGAAAATTTAGAGACCCTTTTGGAGACACCACTTGAAATTCTCTCTTCAGACAATGAAGTGAAGCAAAAGTTCTATCAAATTTTGGAACAACTTGGCCAATTTGAAAACCAAATCCCTGTTAAGCTTCATCATGTTATTTGCAAGCTAAGAACTTTCATTGAAGGGGTTGATGTAAGATTTGTGAGTGCTCAAAAAACTATCCAAGATTATAATCAGCTGCTTCAATCAAGGACTGATATATCAAAGCAATTGATAAGTGTCAAAGCCCGAGAATACCAAAATAAATCCGAAATGTCTCGTGGTAAGATAGAATTTGAAAGGATCAATTCTGAGATTTTTGAACTAGAACAGAAGTTAAGTGGTCTTGTTGAGATTAGAGACAAGTTGAAGAGAAAGTTGGATCATTGTGATGTGATAGATAAAAACCTTAAGACAGAAGTTACACAATGCAAGACTGTGTTACTAAATCTGAAAAAGTCTGAGGTTTCTTACAAAGAGGCCTTAACTAATAAGAAGAAAGTTGAAGATGAATGGACTGATATGAAAAAGAACTTTGCTACCAATAAGAATGTTTGA | 3873 | 0.3669 | MSNFSVSASSSSLMLSPKKYDVFLSFRGEDTRDNITSHLYEALDQKKVETYIDYKLEKGEGIGPALITAIEESHVSVVIFSENYASSKWCLDEIVKIMECKKDRGQIVIPVFYKIDPSHVRNQRGTYEIWFKKHEIDLARNNSPRLFNWRSALTEAANLSGWDFHTYSSESQFIKDIVKDILQRLNLVHPIDPILKGVVGIEENYEGVKSLLEMDSKEVQVIGIWGMGGIGKTTLAIALHAKLSSQFEGHCFLANVREETEKNSINFMRNKLFSELLEEENLHVNVPKVEYRHVTNRLRRKKVLIVLDDVANSEQLDDLISDYDWLGLGSRVIVTTRDKHSISIVDKIYEMKELNKHNSLELFCLNAFKAKHPKSGYEELSKNVVANCKGNPLALKVLGARFRSRSKEVWESELEKLKKIPDMKIQNELKSSYDDLDDDQKNIFLDIACFVKEESKDRITNLFKAYNFFPDIGINDLVEKSLVTISNKGTIQMHDLIQEMGWNIVHQESPKDPGSRSRLWNPNEVYDVLKYNKGTKIVEGITLDVSKIEDLHLSSDSFTKMSEMRYLKFYYGKWNGTCNIYLPNGLDSLSDKLRYLEWHRYCLNSLPSKFRANLLVELCMPFSKLQKLWDGVQDLGNLKEIDLRFSKELVEVPDLSKARNLEWLSLSQCRNLREIHPSILSLDKLKDLELEGCTKIESLIQMDNNHLKSLQNIQLSNCSSLKEFSFTSNNLENLWLDGTSIRELSSSIWCCEKLKMIDLHNCDNLEGFGDDMQNYIGIGSLNTIDLSGCKGLNASNLGFHLKSWQATLRSLDLENCCNLETLPDSIGLLSSLQCLKLSGSNVESLSPNIKNLNNLKELRLDNCKKLVYVPELPSSLRLFSAINCISLITDLTTLDIAFEHRPKRQPYPQSVFFPSAHVPKRFSYQGSTSEVTIKHLPESGLYGLVFCLVLAGSNDKYGVVQFSVNQNSKNIGGKATSLGDLHLVMDHVFLWYCDIGTRAKYISLYSQIQESGAWDNPYDISFHFSLENEEGEWSAKRIRGCGVLPLYHLQESLDTNNLPLEPELELDSCDLISELESLLCDSYMLSPMCTDSTTLSILLENLETLLETPLEILSSDNEVKQKFYQILEQLGQFENQIPVKLHHVICKLRTFIEGVDVRFVSAQKTIQDYNQLLQSRTDISKQLISVKAREYQNKSEMSRGKIEFERINSEIFELEQKLSGLVEIRDKLKRKLDHCDVIDKNLKTEVTQCKTVLLNLKKSEVSYKEALTNKKKVEDEWTDMKKNFATNKNV | 1290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi3g03813 | 1290 | Pfam | Leucine Rich Repeat | 615 | 633 | IPR011713 | - | |
Vivi3g03813 | 1290 | SUPERFAMILY | L domain-like | 492 | 884 | - | - | |
Vivi3g03813 | 1290 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 180 | 447 | IPR027417 | - | |
Vivi3g03813 | 1290 | Coils | Coil | 1211 | 1231 | - | - | |
Vivi3g03813 | 1290 | Gene3D | - | 433 | 501 | IPR036388 | - | |
Vivi3g03813 | 1290 | ProSiteProfiles | TIR domain profile. | 18 | 185 | IPR000157 | GO:0007165 | |
Vivi3g03813 | 1290 | SMART | till_3 | 19 | 159 | IPR000157 | GO:0007165 | |
Vivi3g03813 | 1290 | Gene3D | - | 187 | 350 | IPR027417 | - | |
Vivi3g03813 | 1290 | Gene3D | - | 17 | 186 | IPR035897 | - | |
Vivi3g03813 | 1290 | PRINTS | Disease resistance protein signature | 221 | 236 | - | - | |
Vivi3g03813 | 1290 | PRINTS | Disease resistance protein signature | 705 | 721 | - | - | |
Vivi3g03813 | 1290 | PRINTS | Disease resistance protein signature | 388 | 402 | - | - | |
Vivi3g03813 | 1290 | PRINTS | Disease resistance protein signature | 297 | 311 | - | - | |
Vivi3g03813 | 1290 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 9 | 162 | IPR035897 | - | |
Vivi3g03813 | 1290 | Pfam | TIR domain | 19 | 192 | IPR000157 | GO:0007165 | |
Vivi3g03813 | 1290 | FunFam | Disease resistance protein RPS4 | 535 | 729 | - | - | |
Vivi3g03813 | 1290 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 16 | 187 | - | - | |
Vivi3g03813 | 1290 | Gene3D | - | 353 | 432 | IPR042197 | - | |
Vivi3g03813 | 1290 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 20 | 725 | IPR044974 | GO:0006952 | |
Vivi3g03813 | 1290 | Coils | Coil | 1256 | 1276 | - | - | |
Vivi3g03813 | 1290 | Gene3D | Ribonuclease Inhibitor | 516 | 727 | IPR032675 | - | |
Vivi3g03813 | 1290 | Gene3D | Ribonuclease Inhibitor | 728 | 900 | IPR032675 | - | |
Vivi3g03813 | 1290 | Pfam | NB-ARC domain | 209 | 434 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi3g03813 | Vivi-Chr3 | 65363298 | 65373538 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi3g03813 | 16 | 858 | WRKY Transcription Factor Family | AT4G12020 | 31.265 | 4.43e-106 | 368 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi3g03813 | - | - | psat:127083514 | 2277.67 |