Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03802 ATGAAGAAGGTTTCTCTTTATGCTTGTTTATTACTCAACTTGACTCTTTTGGCTATTGTTCCATATAGCAAGGCTAGTCAAGCTGATAAACTTGATGAGTTGATTCTGTCTAGAAGCTCACAGAATCCTCCCAAGACTTTTACTTGGGCAGCTGAAGATGCATTGCAAACACAGTCTTCTTCATCTGCTTATGTTGTACCTCCTCAAGAGGAGCAAAGGCTAGCTGACAAGATTGTCACATTGCCTGGTCAACCCTATGGAGTTAATTTTGATCATTACTCTGGTTATGTCACAGTTGATCATGAGACTGGAAAAGAACTTTTCTATTATTTTGTGGAGTCTCCCTCTAACTCTTCCGATAAACCTTTAATATTGTGGCTCAATGGAGGACCTGGTTGTTCTTCACTAGGGTATGGAGCCTTTGAGGAGCTAGGACCCTTCAGAATCAACTCTGATGGAAAAACTCTATACCGTAATCCATATGCTTGGAATGAAGTTGCAAATATACTTTTCTTGGAATCTCCAGCAGGAGTAGGCTTTTCCTACTCAAACACCGCTTCTGACTATGAAAAATCAGGAGATAAGACAACTGCCAAGGATGCCTATATCTTCCTAATCAACTGGTTGGAGAGATTTCCAGAGTACAAAACAAGAGATTTTTACCTAACTGGAGAGAGTTATGCTGGCCACTATGTTCCTCAGCTTGCATCCACTATTCTTTACAACAATAAGCTCTCTAACCAAACCATTATTAACCTCAAAGGCATTTCTATAGGAAATGCTTGGATTGATGATGCTACAAGTTTAAAAGGGCTATTTGATTACTTTTGGACTCATGCTTTGAACTCAGATCAAACTCATGAGTTGATCGACAAGTACTGTGACTTCACTTCCGAAAATGTTTCAGCAATATGTGTCAATGCAACCACAAAGGCCTTAATCGAGAAAGGAAAAATAGATTTCTATAACATCTATGCTCCACTTTGTCATGATTCTTCTCTCAAAAATGGCTCAACTGGTTATGTAAGCAATGAATTTGACCCTTGTTCTGATTACTATGGTATTGCCTATCTAAATACACCAGAGGTCCAAAAGGCTCTTCATGCAAAACCTACAAATTGGACCCATTGCACTCGTGTTATTCATACCTGGAAAGACAGTCCAGTTACCATCCTTCCCACCATCAAGTACCTCATTGACAGTGGCATTAAATTATGGATATACAGTGGTGATACAGATGCAAGGGTACCAGTTACATCTTCAAGATATTCAATCAACACTCTTAAGCTTCCTATCAACTCTGCTTGGCGTCCATGGTACTCCGGACAAGAGATTGGAGGATATGTTGTGGGATACAAAGGACTGACATTTGTGACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAGCCGGAACGAGCTTTGACTTTGATCTCATCATTCATCGATGGAATTCTGCCACCTGTTTCACCATCAAACTAA 1485 0.402 MKKVSLYACLLLNLTLLAIVPYSKASQADKLDELILSRSSQNPPKTFTWAAEDALQTQSSSSAYVVPPQEEQRLADKIVTLPGQPYGVNFDHYSGYVTVDHETGKELFYYFVESPSNSSDKPLILWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNPYAWNEVANILFLESPAGVGFSYSNTASDYEKSGDKTTAKDAYIFLINWLERFPEYKTRDFYLTGESYAGHYVPQLASTILYNNKLSNQTIINLKGISIGNAWIDDATSLKGLFDYFWTHALNSDQTHELIDKYCDFTSENVSAICVNATTKALIEKGKIDFYNIYAPLCHDSSLKNGSTGYVSNEFDPCSDYYGIAYLNTPEVQKALHAKPTNWTHCTRVIHTWKDSPVTILPTIKYLIDSGIKLWIYSGDTDARVPVTSSRYSINTLKLPINSAWRPWYSGQEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIDGILPPVSPSN 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03802 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 78 472 IPR001563 GO:0004185|GO:0006508
Vivi3g03802 494 SUPERFAMILY alpha/beta-Hydrolases 76 487 IPR029058 -
Vivi3g03802 494 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Vivi3g03802 494 Gene3D alpha/beta hydrolase 73 331 IPR029058 -
Vivi3g03802 494 Gene3D - 349 383 - -
Vivi3g03802 494 FunFam Carboxypeptidase 391 485 - -
Vivi3g03802 494 FunFam Carboxypeptidase 72 331 - -
Vivi3g03802 494 Gene3D - 391 485 - -
Vivi3g03802 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Vivi3g03802 494 Pfam Serine carboxypeptidase 82 485 IPR001563 GO:0004185|GO:0006508
Vivi3g03802 494 FunFam Carboxypeptidase 348 486 - -
Vivi3g03802 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Vivi3g03802 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Vivi3g03802 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Vivi3g03802 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03802 Vivi-Chr3 65116512 65118589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03802 346 485 Calmodulin-binding Proteins AT2G22960 30.872 4.76e-14 68.9