Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03792 ATGGCACCACCAAAACGACTCCGCATCACTCCGCTCAATGATCCATCCACCGCCTACTCCTCCGATGACGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCGATGAAGAAGAAGTTTCAGAAGAAGGAGAAGAAACTGATCAGAATGAAGAAGATGATGATGATGATGATGATGAAGAAGAAGAAGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAAAAATCCTCCACCTTCTACCCCAATCTCCAACCCTAAACCCGAGTCCGGTTCCGAATCGGAGTCTGGTGCCGAGTCCGGATCTGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCTCGCATCAAAGCCCATGAAAGCCCAACCACAAGCCCAATCTACTCCCGTACCGGCCAGATCTGGAACAAAGCGTGCCAACGAAAACGGTTCCAAACCTGCTAAGAAGAAAACAATCGCCGGCGGCGGTGGTGGTTCTGAGAACGAAGCGGATGGAGACGGTGACGTGAAAATGACCGGGGAAGACTCTAAGAAGATGAATCCGAGAGTCTTCACTGAAGAAGATGAGATTGCCATTCTGAAAGGTCTCGCTGACTTCATTTCCAAAACTGGTAATGATCCGATGAAGGACCTGGTGGCATTTCATAGGTTTGTGAAGAAATCTATTCATGGTGATGCGACTAGCGAACAGCTGAAGCGGAAGGTTCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTAGTTTCACTAAAGAGCATGATAAGAGAGCTTTTGAACTTTCCAAAAAGGTTTGGGGCAATACTGAAGGCAATAATGGAGGCAATGAAGGGGAAGAAAATGGGAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAAGCTCCTGTGAGAAACAATACTTCTGCTAAGAAAGAAGTAGTTGCCAAGAATGGTGCTGGAAAAGATGAGGGTGTTGTTGATAAAAGCTTGGCTTTGAGTGAAATGTGTAAATTTGGTGAAGCTGCGGGGTTATCCTTGTTGAACAAGGCTATGGAGAGGGGAATGGGATTGTTGGAGGAGTCTAAGGCTGATGAGTTTGATGAGAGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTTGTGACTCGAGGGCAACTGCTCAAGGATCAGATTAGGATAGCATTGGAGGCGTTGAAGAAGAAGTCTATCAATTAG 1230 0.4593 MAPPKRLRITPLNDPSTAYSSDDDQPPSSKKPEDEVVDEEEVSEEGEETDQNEEDDDDDDDEEEEEGSSSEEEQVQPPSKNPPPSTPISNPKPESGSESESGAESGSESDSEQEPTPPNAKVKPLASKPMKAQPQAQSTPVPARSGTKRANENGSKPAKKKTIAGGGGGSENEADGDGDVKMTGEDSKKMNPRVFTEEDEIAILKGLADFISKTGNDPMKDLVAFHRFVKKSIHGDATSEQLKRKVRGLKMKFKDGGSFTKEHDKRAFELSKKVWGNTEGNNGGNEGEENGKVNEKTPKSTKKEAPVRNNTSAKKEVVAKNGAGKDEGVVDKSLALSEMCKFGEAAGLSLLNKAMERGMGLLEESKADEFDERWRKVQIAEMELFVTRGQLLKDQIRIALEALKKKSIN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03792 409 MobiDBLite consensus disorder prediction 174 194 - -
Vivi3g03792 409 MobiDBLite consensus disorder prediction 91 116 - -
Vivi3g03792 409 MobiDBLite consensus disorder prediction 270 315 - -
Vivi3g03792 409 MobiDBLite consensus disorder prediction 1 194 - -
Vivi3g03792 409 MobiDBLite consensus disorder prediction 37 71 - -
Vivi3g03792 409 Pfam Protein of unknown function, DUF573 192 276 IPR007592 GO:0006355
Vivi3g03792 409 PANTHER BNAANNG10740D PROTEIN-RELATED 49 402 IPR007592 GO:0006355
Vivi3g03792 409 MobiDBLite consensus disorder prediction 131 152 - -
Vivi3g03792 409 MobiDBLite consensus disorder prediction 289 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03792 Vivi-Chr3 64878861 64880363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03792 121 403 GeBP Transcription Factor Family AT4G25210 29.934 8.64e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi3g03792 DUF573 2.6e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03792 - - vvo:131633905 481.1