Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03791 ATGGCTATGCAACAATATGTAGGTTCTTCTTCTTCATCTTCATCTTCTATGGTTGCATCCTTGAAGAAATTTGATGTTTTTATTAGTTTCTGTGGTGAGGATACTCGTAAAACCTTCACAAGCCATCTTTATGAAGCTCTTCACAAAAAAGTTATGACATTTATTGACTTTGAGCTTGAAAAAGGAGATGAGATCTCATCAGCACTCAACAAAGCCATTGAGGGGTCAGATGCATCTATAGTTATATTTTCAAAAGACTATGCATCTTCAAAATGGTGTTTGAATGAACTCGTTAAGATTCTAGAATGCAAGAGAGATCGAAGACAGATTGTCATACCTGTTTTCTATGATATAGAACCATCTGATGTGAGGAATCAAACTGGGATTTATAAGCAAGCTTTTGAAAAACATGAGCTAGATTTGAAACACAACAAAAACAAGTTGCAGAAATGGAAAGATGCACTCACTGAAGCGGCCAATTTATCCGGCTGGAACTCTCAAAATTGCGGGATGGAGTCAAATTTTATTAAGGACATTGTGGAAGATGTTTTGAAAAGATTGAATCGTAGACATCCATTTGAAGTTAATAAAGAACTTGTTGGCATTGAGAAAAAGTATGAAAAGATGGAATCTTTATTGAAAATTGGATCAAAGGATGTTAAAACTCTTGTATTATGGGGCATGGGAGGCATAGGAAAGACCACTCTAGCAAAACACTTATATGCTAAATTGTGTTCTCAATTTGAACATCATTGCTTCATTGAAAATATAAGGGAAGAATCAACCAAGTGTGGACTCAAGTCTGTAAGTAACAAACTTTTTTCTGAATTGTTGGAGCTTCCTCTCAATGCACCTTATGTAGAAACCCCAATTTTCATAAATCGACTTGCACATGAAAGAAGTCTCATTGTGTTGGATGATGTTGCAACCATAGAGCAAGCAGAAAATGTTAACATAGTCAATAGTTGCTTGGGAGAGGGAAGTAGAGTCATTATCACAACTAGAGATATGCAGATATGTAGCCAGTTTGATGAGTGTGAAATATATAAGTTTGAGGAAATGAATGCAGATGAATCCCTTCAACTATTCTGTCAGAATGCTTTTGGAGAAAAATGTCCTAAGGATGGATATGGTCATCTATCACAAGAAGCAATTCGTTATTGCAGAGGCAATCCCTTAGCTCTGAAAGTTTTAGGTGCAAATTTTCGTACAAAAAAAAGTAAAAAAGGCTGGGAAAGTGAATTGGAGAAACTCAAAAAGATTCCCAATAGAAAAATCTATGATGTGTTAAAATTGAGTTATGATGACTTAGATCGCACTCAACAAGACATATTTCTAGACACTGCATGCATCTCCAGATCACTAGTTTATTATAACTCCCTTACTCAAAAAAAATACTTAACAGCAGTATGGAATGCTTGCATGTTTTATCCAGATAGTGGATTAGAAGTCCTTCTAGATAAAACACTCATATTCTTTGATGACGAACGCTTTATCAGTATGCATAATTTGTTAAAAGAAATGGGAAAAGAGATTGTTATGACAGAATCAGTCAAAGACCCCGGAAGAAGAAGTCGATTGTGGGATCAAAAGGATGTGTATGATGTATTGAAGTATAACAAGGGAACTGAAGTTGTTGAAGTTATAGAATTTAATATTGATCAACTTGGGGATTTGTACTTGAGCTCTGATTGCTTTAAAAGCATGACCAACTTAAGACATCTTCATATCACTACAAAAAGTCTAGATGAAGAGAGTAGACTGCATATCCTTGAAGGTCTTGAGTGGTTGTCTGATAAATTGAGGCATCTTTGTTGGAATTTTTTCCCACTTGAGTCTTTGCCATCAACCTTTTGTGCAGAATGGCTAGTACAACTTAAAATGCAGAATAGCAAGCTTAAAAAGCTTTGGAATGGAATTCAGAGGCTTGACAATTTAATGATTCTTGATCTTGGTTTCTCCAAAGACCTGATTGAGATTCCAGATTTATCAAGAGCCCCAAATCTTCAAGTAGTATCCCTTTCTTTTTGTGAGAGTCTCAGTCAACTCCATCCATCCATTTTCAGTATCCCCAAGCTTATAGAACTACATTTAGATGGCTGCAAAAAAATTAAAAGCCTGAAAAATAACATTCATTTAAAATCTCTCAAATTACTTGATCTCTCTTTTTCTTCATATCTTACGGAATGTTCTCCATTGATGTCGTGCAATAGGAAACTTACAGGACTGCAGCTTACAGGATGTACACAAATCAATACATCGAGTTTTTGGCTCATCCTTGATGGAACACCATTTTTAAAAGAACTATATTTGAGTCGGTGCTGCAATTTAGAAACACTCCCTGACAACATCAAAAACAATTCAATGTTGGAAATTCTTATTTTAAATGAATGTTCTAAACTTAAGTCTATACCAAAGCTTCCAGCCTCCTTGCAAACTCTTGAGTTAAATGAATGCAGGAAACTTAAGTCCCTACCAAAACTTCCAGTTAGCTTGCAAAGTTTGAAAGCCATGAATTGCATTCATTTGGACACTAACTCCATTCAACGATCAATACTTGCGAATCTGTCACTGAGTAACAGGAATCTGCCAACTCATCCTTGGGAGTTATTTTTCTTTCCTGGTGGTGAAGTTCCTAGTGAGTTTTATTTTCAGACAACAAAGGCTTCCATAGTTATTCCTCCTATTCCAAAATATGGTTTGTGTGGTTTCATCATTTGCATCATTCTCTTTGGAGAAGCGGGTCTCACTTACTCTGGTGAAATGTTTTGTACTATTTATCAACAAACCAAAGAAATTGACCTACACAGGATGCAGTGTAGTACAGGATTTATTTCAGATCATGTATTGTTAGCCTACATAAGCTGTTATAATTCTGATTGGGTGAAGGTTGGGAGTGAAAGTGGAAGTGATGATTACAACCTTTCATTTAAATTCAATTATGAAAAAGGTCGAGGTATGAGAACAGAGTGGATCAAGAGTTGTGGGGTTATCCCAGTATATGACTTGAAACATAGTTTTGTGTTGGATCGTAGAACTAGTGGAGTTGAAATTGTTGAAATACAGTCCAACACTCAACTATCTGATGATTCTGATGATATTAATGAAATACAGTCCAACACTCAACTATCTGATGATTCTGATGAAATTGTTGAAATACAATCCTACGCTCAACTATCTGATGATTCTGATGATATTCAAGTTTTTGATGATTGTCAACAACATTCGAAATTTGATATTAATGAGTCACAACACCAAGAAATTGGAGCTGAAAATGAAGATGACCAGCAACAACTAATTATTCCTCAGATAGAAAATACGGAGGAGTTGAATGATACATCTCCTTGTTCCTGTTCAATCGGTCTTTTGTTGAAGCACATACTAGAAGAATCAAAACGGCTATTTCTAAAGCAAAGATAA 3420 0.355 MAMQQYVGSSSSSSSSMVASLKKFDVFISFCGEDTRKTFTSHLYEALHKKVMTFIDFELEKGDEISSALNKAIEGSDASIVIFSKDYASSKWCLNELVKILECKRDRRQIVIPVFYDIEPSDVRNQTGIYKQAFEKHELDLKHNKNKLQKWKDALTEAANLSGWNSQNCGMESNFIKDIVEDVLKRLNRRHPFEVNKELVGIEKKYEKMESLLKIGSKDVKTLVLWGMGGIGKTTLAKHLYAKLCSQFEHHCFIENIREESTKCGLKSVSNKLFSELLELPLNAPYVETPIFINRLAHERSLIVLDDVATIEQAENVNIVNSCLGEGSRVIITTRDMQICSQFDECEIYKFEEMNADESLQLFCQNAFGEKCPKDGYGHLSQEAIRYCRGNPLALKVLGANFRTKKSKKGWESELEKLKKIPNRKIYDVLKLSYDDLDRTQQDIFLDTACISRSLVYYNSLTQKKYLTAVWNACMFYPDSGLEVLLDKTLIFFDDERFISMHNLLKEMGKEIVMTESVKDPGRRSRLWDQKDVYDVLKYNKGTEVVEVIEFNIDQLGDLYLSSDCFKSMTNLRHLHITTKSLDEESRLHILEGLEWLSDKLRHLCWNFFPLESLPSTFCAEWLVQLKMQNSKLKKLWNGIQRLDNLMILDLGFSKDLIEIPDLSRAPNLQVVSLSFCESLSQLHPSIFSIPKLIELHLDGCKKIKSLKNNIHLKSLKLLDLSFSSYLTECSPLMSCNRKLTGLQLTGCTQINTSSFWLILDGTPFLKELYLSRCCNLETLPDNIKNNSMLEILILNECSKLKSIPKLPASLQTLELNECRKLKSLPKLPVSLQSLKAMNCIHLDTNSIQRSILANLSLSNRNLPTHPWELFFFPGGEVPSEFYFQTTKASIVIPPIPKYGLCGFIICIILFGEAGLTYSGEMFCTIYQQTKEIDLHRMQCSTGFISDHVLLAYISCYNSDWVKVGSESGSDDYNLSFKFNYEKGRGMRTEWIKSCGVIPVYDLKHSFVLDRRTSGVEIVEIQSNTQLSDDSDDINEIQSNTQLSDDSDEIVEIQSYAQLSDDSDDIQVFDDCQQHSKFDINESQHQEIGAENEDDQQQLIIPQIENTEELNDTSPCSCSIGLLLKHILEESKRLFLKQR 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03791 1139 Gene3D - 189 348 IPR027417 -
Vivi3g03791 1139 ProSiteProfiles TIR domain profile. 22 187 IPR000157 GO:0007165
Vivi3g03791 1139 FunFam Disease resistance protein (TIR-NBS-LRR class) 355 438 - -
Vivi3g03791 1139 Pfam Leucine Rich Repeat 623 641 IPR011713 -
Vivi3g03791 1139 Pfam NB-ARC domain 210 424 IPR002182 GO:0043531
Vivi3g03791 1139 Pfam TIR domain 23 200 IPR000157 GO:0007165
Vivi3g03791 1139 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 164 IPR035897 -
Vivi3g03791 1139 SUPERFAMILY L domain-like 555 866 - -
Vivi3g03791 1139 SMART till_3 23 161 IPR000157 GO:0007165
Vivi3g03791 1139 PRINTS Disease resistance protein signature 295 309 - -
Vivi3g03791 1139 PRINTS Disease resistance protein signature 222 237 - -
Vivi3g03791 1139 PRINTS Disease resistance protein signature 711 727 - -
Vivi3g03791 1139 PRINTS Disease resistance protein signature 388 402 - -
Vivi3g03791 1139 Gene3D Ribonuclease Inhibitor 532 876 IPR032675 -
Vivi3g03791 1139 Gene3D - 21 188 IPR035897 -
Vivi3g03791 1139 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 711 IPR044974 GO:0006952
Vivi3g03791 1139 Gene3D - 353 438 IPR042197 -
Vivi3g03791 1139 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 189 - -
Vivi3g03791 1139 SUPERFAMILY "Winged helix" DNA-binding domain 425 538 IPR036390 -
Vivi3g03791 1139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 447 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03791 Vivi-Chr3 64720666 64738868 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03791 19 852 WRKY Transcription Factor Family AT4G12020 28.972 1.42e-79 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03791 - - vvo:131628915 1456.04