Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03784 ATGGCTTACAATGTGAAACAGAAACTCTTCTCAATTACTCTTCTCTTCTGCATAATCTTTTCACCAACAGAAACTGCATCAACATTCAGCCATTACAATTGCACAAATATTCAAACATATAATCCCAAAAGCACTTACAAAATCAACTTAAACACACTCTTATCAACACTTTCATCTAAAGCTTCTGATACACTCAACCATGGTCACTATAATACTAGTATAATTAGTACTATCGATGAACCAGAAGACACTGTCTATGGTTCATTCATGTGCATTGGAAACACTAATCACTGTGGTGAATGTGTTAGAAACTCAACCAAAACACTTACCTCAATGTGTGATTCTAAAGAGGGTATTATTTGGTCTGACGAATGTTTGGTTCGTTATTCCAATCGATCTTTCTTTGATACCATGGAAGAATCTCCGTCATGGTGTGTGAAGGACTCGATTGATTATCAAGGTCCGTTGGACGGATTCAACAAAATGCTAAGCTCTTTGATGGTGGATCTTGTGACACAAGCAAACGGAGATTCTAAGCGAAATTTTACCAAACTTGTTCTCAAGAAAGAGATTTACTACGAGGATAAATTCTTGTATGGACTTGCTCAGTGTATACCGAGTCTCTCGAATGATAATTGCATGAAGTGTTTGAAGGATGCTATTGAATATCTTCAAACTTCATGTGCTAGAGGAAAGCTTAGAGGAAGTGTTTTATATCCAAGTTGTGTTGTTAGATATGATCCTAATCCATTTTTTCCATTACTTAGAGGACAAGAAAAGGTAAATCGAGTACCGCGATATTCCATAATTTTACATGTTCTTGTTCCTATCTTCTCTGTCACGGTTTTCTTTTTCACATATTATGTGCTATGTCGAAGAGCGAGGAAGAATCTCAAGTATCACAGAGAAAATTTTGGAGAAGACATTTCATCAGAAGTACACTCTCTGCAATTTGATTTTGATATGATTCGACTAGCGACAAACAAGTTCTCTGATGATAACAAGATAGGAGAAGGTGGTTTTGGAGATGTTTACAAGGGAATGTTTCCGAATGGATTTGAAATAGCAGTGAAGAGGCTCATAAGAAATTCAAGTCAAGGAGCTGTGGAATTTAAGAATGAAGTGTTGTTAATAGCGAAACTTCAACACAGAAATCTTGTGAGACTTTTAGGATTTTGCATTCAAAGGAATGAGAAGATACTCATTTATGAGTATATGCACAACAAAAGCCTTGATTACTATCTATTTAGTCCTGAAAACCATAAGAAATTAACTTGGCATGCGCGTTACAAGATTATAAGAGGGATTGCGCGAGGTATTCTTTATCTACATGAGGATTCTCATCTGAAAATCATACATTGTGATCTTAAACCGAGCAATATTTTGTTGGATGATAAAATGAATGCGAAGATATCGGATTTTGGCTTGGCGAGGATTGTTGCAATTGATCAAATGCAAGGAAATACTAGTATAATTGCGGGGACATATGGCTACATGTCTCCCGAATATGCAATGCTTGGCCAATTTTCTGAGAAATCAGATGTATTCAGCTTTGGAGTCATAATTCTTGAGATTATCAGTGGAAAAAGAAATGTTGATTATAACGGAGTAAATTCCATCGATGACCTCGTTAGCCATGCTTGGAAGAAATGGTGGGAAAATAGGCAATTGGAACTATTGGATTCTGCATTGATCTACTCATTTTCAGAAAGAGAAGTAAATAGGTGCATTCAGATAGGTCTACTATGTGTGCAAGAAAATCCAGATCGAAGACCAACTATGGCAACAATTGCTTTGTATTTCAACTGTGATTCAATAGATCTACCACTACCTCAACAGCCGGCATTTTACATGCGTGGAAAAATCGAATCAAAGGTTGCTAGTAAAAAATCGATGACGGGTCAACCTAGGAGTTATTCAGTGACAAGGTTTTAA 1935 0.3649 MAYNVKQKLFSITLLFCIIFSPTETASTFSHYNCTNIQTYNPKSTYKINLNTLLSTLSSKASDTLNHGHYNTSIISTIDEPEDTVYGSFMCIGNTNHCGECVRNSTKTLTSMCDSKEGIIWSDECLVRYSNRSFFDTMEESPSWCVKDSIDYQGPLDGFNKMLSSLMVDLVTQANGDSKRNFTKLVLKKEIYYEDKFLYGLAQCIPSLSNDNCMKCLKDAIEYLQTSCARGKLRGSVLYPSCVVRYDPNPFFPLLRGQEKVNRVPRYSIILHVLVPIFSVTVFFFTYYVLCRRARKNLKYHRENFGEDISSEVHSLQFDFDMIRLATNKFSDDNKIGEGGFGDVYKGMFPNGFEIAVKRLIRNSSQGAVEFKNEVLLIAKLQHRNLVRLLGFCIQRNEKILIYEYMHNKSLDYYLFSPENHKKLTWHARYKIIRGIARGILYLHEDSHLKIIHCDLKPSNILLDDKMNAKISDFGLARIVAIDQMQGNTSIIAGTYGYMSPEYAMLGQFSEKSDVFSFGVIILEIISGKRNVDYNGVNSIDDLVSHAWKKWWENRQLELLDSALIYSFSEREVNRCIQIGLLCVQENPDRRPTMATIALYFNCDSIDLPLPQQPAFYMRGKIESKVASKKSMTGQPRSYSVTRF 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03784 644 SUPERFAMILY Protein kinase-like (PK-like) 314 618 IPR011009 -
Vivi3g03784 644 Gene3D Phosphorylase Kinase; domain 1 292 405 - -
Vivi3g03784 644 FunFam Cysteine-rich receptor-like protein kinase 10 292 405 - -
Vivi3g03784 644 Pfam Protein tyrosine and serine/threonine kinase 333 598 IPR001245 GO:0004672|GO:0006468
Vivi3g03784 644 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Vivi3g03784 644 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Vivi3g03784 644 Gene3D - 26 134 IPR038408 -
Vivi3g03784 644 Gene3D - 145 251 IPR038408 -
Vivi3g03784 644 ProSiteProfiles Protein kinase domain profile. 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03784 644 ProSiteProfiles Gnk2-homologous domain profile. 140 251 IPR002902 -
Vivi3g03784 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Vivi3g03784 644 ProSiteProfiles Gnk2-homologous domain profile. 28 134 IPR002902 -
Vivi3g03784 644 CDD STKc_IRAK 336 598 - -
Vivi3g03784 644 Gene3D Transferase(Phosphotransferase) domain 1 406 605 - -
Vivi3g03784 644 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03784 644 Pfam Salt stress response/antifungal 157 247 IPR002902 -
Vivi3g03784 644 Pfam Salt stress response/antifungal 34 131 IPR002902 -
Vivi3g03784 644 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 38 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03784 Vivi-Chr3 64579635 64582573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03784 9 625 Receptor kinase-like Gene Family AT4G05200 42.373 1.04e-165 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi3g03784 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03784 - - mtr:11443024 1073.15