Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03755 ATGAGCACTATTACGTTTTCACATGCTAAGGGTTCTCTTCAAATTTTCATTGACTTACAAGATACTCAAACAAAACATCAAGAAACACATCTCTCCACCAATGAAAACAATATTGGAAATGCTGTTGCCGCTCTTATGGCAGACTTTGCTCCTAAGACAAAGGTTCTTAGAAATGGTAAATGGTGCGAGAAAGAAGCTTCAATCCTAGTTCTAGGTGATATCACTAGCATCAAACTTGGTGACATAATACCATTCAATGCTCGTCTTCTAGAAGGTGATCCTTTAAAGGTTAACCAAGCAACATTAACACGAAAATCACTTTCGGTCACTCGACATCCAGAACAAAAAGTTTTCTCATATTCAAATTGCAAACAAGGAGAAAATGAAGTCATTTTTATTGCAACCAGTATTCACACATTCATTGGAAGAGCAACACATTTGGTTGACCATATAAACAATGTTGGAAAATTCCATATGGTCCTCAAATCAACTGAAAACTTTGGTATCTGTTCTATTACAGTTGTCATTTTGATTGGTAGAATTCCTATTATTATGAAAACTATTTTGTTTGTGTCAAGGGCTATTGGTTCTCATAAATTTTCTAAACAAGGTGCTACTGCAAAAAGCATAACTCTCACTGAGGAAATAACTGGTGTAACCATTATTGACAGTGGAAAGACAAAGACTTTTACATTTACCACATTGCTCATTGATATGGACTTGATTAAAGTTTTTATTAAGGGTATATATATGGAACGTATGATTCCTCTTGTTGCTAGTACTGTTAGGTTAGCCTCTTTTGTTGAAGCTAATTCTAATTACTCTAAAGTTCTGCTCTAG 840 0.3464 MSTITFSHAKGSLQIFIDLQDTQTKHQETHLSTNENNIGNAVAALMADFAPKTKVLRNGKWCEKEASILVLGDITSIKLGDIIPFNARLLEGDPLKVNQATLTRKSLSVTRHPEQKVFSYSNCKQGENEVIFIATSIHTFIGRATHLVDHINNVGKFHMVLKSTENFGICSITVVILIGRIPIIMKTILFVSRAIGSHKFSKQGATAKSITLTEEITGVTIIDSGKTKTFTFTTLLIDMDLIKVFIKGIYMERMIPLVASTVRLASFVEANSNYSKVLL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03755 279 Pfam E1-E2 ATPase 50 178 - -
Vivi3g03755 279 Gene3D - 34 219 - -
Vivi3g03755 279 PANTHER CALCIUM-TRANSPORTING ATPASE 34 265 - -
Vivi3g03755 279 SUPERFAMILY Calcium ATPase, transduction domain A 51 148 IPR008250 -
Vivi3g03755 279 Gene3D - 235 259 IPR023299 GO:0000166
Vivi3g03755 279 Gene3D - 220 234 IPR023214 -
Vivi3g03755 279 Gene3D - 51 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03755 Vivi-Chr3 63865862 63866701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03755 51 264 Primary Pumps ATPases AT2G18960 51.464 4.62e-73 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03755 K01535 - vvo:131658216 531.946