Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi3g03746 | ATGGGAGATTGTTCACAAAACTCAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGAGGAGAAGATACACGATTAGGCTTCACGGATCACCTATATGCAGCTTTGGTGCGCAAGAGTATAATAACTTTCAGAGATGATGAAGAACTTGCAAGAGGTGAAGTAATCTCACAAAAGCTACTCCATGCCATTGAGGAATCACTCTCAGCAGTTGTTATTATCTCCAAAAACTATGCTAACTCAGCTTGGTGTTTGGATGAGTTAGTCAAGATTCTCGAATCCAAACGTTTGTCAGGACAACAAGTGTTCCCTATCTTCTATGGCGTGGATCCCTCCGATGTAAGAAATCAAAGGGCAAGTTTTGCTGAGGCTTTTAGGAAACATGAAGAAAAATTTGCTGAAAGCAAAGAGAAGGTGCAAAAGTGGAGAGATGCATTGAGAGAGGTCGCCAATTTGTCAGGCTGGGATTCTAAGGAGCAACATGAAACAAAACTCATTGAAGAAGTTGTTGCACAAGTATGGAAAAAACTGAAACTCAAATTCCCATCCTATAACGATGGACTGGTTGCAATTGATGCAAGATTGGAAGAATTATATTCAACTCTGAACATAGGATCGGAGGATGTTCGTTTCATAGGGATATGGGGCATGGGTGGGATAGGCAAAACGACTCTTACTACAGCTCTTTACAAAAAAATTAAAAGCCAGTTTGATGTAAGTTGCTTCATTGCTAATGTAAGGGAAGTTTCGGGGGAAAGAAACGATGGCATGCTACAGATACAAAATAAAATTCTTTCTCATTTGAACATAAAAGGAATGGTAATTGAAACATTAAGCGAAGGAAAGGACAGCTTAAGAAACCTTTTATCCAACAAAAAGGTTCTAATTGTCCTTGATGATGTAAGTTCTAAAAGCCAACTTGAGAATTTGGCTGGAAGCCAGGAATGGTTCGGTCGAGGGAGTAGAATTATAGTTACGACTAGGGATAAGCACCTCTTGATATCGCATGCTGTATTGTTTGAAATGTATGAGAGTAAAATCTTGAATAAAAGTGAATCCCTTCAACTTTTTTGTGAAAAAGCTTTTATGAAGGACAAGCCGGAAGAAGATTATTTAGAGTTATCCAAAAGTGTGGTCGAATATGCTGGAGGTCTTCCTTTGGCTTTTGAAGTGTTGGGTTCTTTTCTTTGCGGAAGAAGGATATCTGATTGGGAAGATGCTTTGATCAAAATCAAACAAGTTCCACATGATGATATCCTAAACAAACTTCAAATAAGTTATGACATGTTAGAAGATGAACACAAGACTTTATTTCTAGATATTGCCTGCTTTTTTAAGGGATGGTATAAACATAAAGTGATACAGATATTGGAAAATTGTGGCTTTCATCCAACACTTGGAATAAATGTTCTTATAGAAAAATCACTCGTAACCTTCGATGGAAGAGTTATTGGGATGCATGATATGCTAGAAGAAATGGGTAAAACCATAGTTTTTCTAGAATCTCCTAATGATCCCGGAAAACGGAGTAGATTGTGGTCTCTAGAGGATATTGATGAAGTACTAAGAAAAAATAAGGGAACTGAACTTGTTCAAGGTATTGTTTTGAAGTCATCACCATCTATGTCATTTGAAGCGCGTTGGAACCCCGAGGCCTTCTCAAAGATGTGTAATCTTAGGTTACTCATTATATTATGTGATTTGCATCTTTCACTTGGTCTGAAATGTCTTTCTAGCTCACTAAAAGTGCTTATATGGCGGGGATATCCAATGCATACTCTACCACTTGGAGTTCAACTGGATAAGCTTGTTCACTTACAGATGAACAATAGTAAAGTCAAACAACTGTGGAAAGGAACTCAGTATTTTGGGAAGCTGAAAGTAATCGATTTAAGTAATTCCAAAAATCTTCGTCAAACTCCAAATGTCTCTGGAGTTCCATACCTTGAAGAGCTGCATCTTAATGATTGTACAGACCTTGTTGAAGTTCACCAATCTGTTAAAGAGCACAAAAAGCTCGAGATATTGAGCTTGATAGGATGTGCGAATCTGAAAACCTTTTCAAGTACATTGGAAATGGATTCCTTGAAAACGCTCATTCTATCTGATTGCTCAAACATTTCACGACTTCCTGAATTTGGAAAAAATATGATAAGCATGTCAGTGCTTAATTTAATGCATTGTAAAAATATTGTGTGCCTTCCAAACAGCATTAGTAACCTGAAGTCTCTCAAAATTCTCAATATATCAGGATGCTCAAAAATTTGTAGCCTGCCAGACGGTATAAGGAAAAACACGGCTTTGGAGAATCTTGACTTGAGTAGGACTGCTATTGGAGAAATGGACCCCTCCCTACTTCAATTAGGGAATCTCAAAATATTATCTTTAAGTGGATGTGGCTTGCCAGCTTCCGACTCTCGACAGGACGTGAGTCGGCCATATAGGAATCGGCTAAGGTATTTCTCAGATGACACAGGCTTAATATTGCCTTCTACTTTCTCAGGTCTTTCCTCATTAACTGTTTTGGATTTGAGCTATTGTAATCTCACTGATGATTCAATTCCCGAAGACATTGATGGCTTATCATCATTGGAGAGACTAATTCTATCTGGGAATGATTTTCTGCGCCTACCCACTTGCTACTTTGTTAATCTTTCAAAGCTTCGCTATCTTGAATTGGAAGACTGTCCTCTGCTTCATTCTGTACCATTGCTTCCACCACATGCATGCTTGTACTCAACAGATTCAGATGCAAAGGAATCTAAAATATTGGATCCTCAAAAGATATGGAAGCTGTTTGAATCAAGCAACAAAGAACTCTTTCTCTCACCCGGGTCTTTGATAATTGATCATCCTTATCCTGTGTACACGGAGATCCCTTCGAGATTTGATAATCATAATTTTTTTCCCTTGAGCTCATCATATGTGTCAGAAGCTGACTCAATTGCATCAATAACCTTAAAGATCCCTACGGATTGTCGTTCAAGTAATGAGTGGGCAGTTGCTGTATTTGTGGCGTTGGAGGAAATTGATGAAGGCTTACGGGCCAGAGAAAAGCTGCTTGACAATACCAAACCAGATTTGAAGGGAAATCAATGCATTGGTTATTTAATCCTATTGATAATAGTGATTTGGCTATTAATCTGTGTATGGTTTCGTATTCCAATAAAAACTTCTACCAGACAAATGCGCATGCGTTGGAACTTTGATACTTTAGAACCTGAAGATGCCTCATCCTTATCTCTCTTCGCTAGTTCAACGGCAAGCAATAAACTGTACATGTTCACAATGGTAGGGAGTGGTGATTTTATCTACATTCGGCGACACACAAGAGGGGAGCGAAAGACCATGCACAAATCCTTTAGCAAGCATCGGAAGCCAGACTTCAGGGAAAACAGTTTGTTGCATTTTGAAGTGCAAGTGGAAGGGTGCAAGATTAGGAAGTGCGGATGGCGTGTGTTGCACAAGGAAGATTATCTTGAAGAACTTAAAGAGGTGAACAACGGTGAACTTTCTATGGCACCTTCAAATTCCGAGCATGTCAGTGGTATGTGCAAATCAACCGTGGATGAATTGAAGGGAGAGAATGTGGAGAACATAGAAAAATCCAATGAAAATTTCTCTTTGGGAAAAATATTTCAGAGTATTAGACAAGGACTAGGTTTAAGCATGCTAATTTTTATGTCAATGATGGTAGCTGCTACAGTATTCCCTCTGCCTGTGCAAGGTTTCGGCTTTAAAAAGCACACCGCAACAAATGAAGTCCAGAATAAACCATTTAAGTCACATCGGGTTTCCCGCAAAACTGTATTGAAGGTCATTACACCACAATTACAAAGCAGTCATAGATTAAATGTGAGCCAACGGTTGTCATTTCCAATATACCAGCTTCCAACGAGGACAAATTTCTCTCAGACTCACTTTTGTTCTTACTTAACTAGATGA | 3942 | 0.3864 | MGDCSQNSKWKYHVFLSFRGEDTRLGFTDHLYAALVRKSIITFRDDEELARGEVISQKLLHAIEESLSAVVIISKNYANSAWCLDELVKILESKRLSGQQVFPIFYGVDPSDVRNQRASFAEAFRKHEEKFAESKEKVQKWRDALREVANLSGWDSKEQHETKLIEEVVAQVWKKLKLKFPSYNDGLVAIDARLEELYSTLNIGSEDVRFIGIWGMGGIGKTTLTTALYKKIKSQFDVSCFIANVREVSGERNDGMLQIQNKILSHLNIKGMVIETLSEGKDSLRNLLSNKKVLIVLDDVSSKSQLENLAGSQEWFGRGSRIIVTTRDKHLLISHAVLFEMYESKILNKSESLQLFCEKAFMKDKPEEDYLELSKSVVEYAGGLPLAFEVLGSFLCGRRISDWEDALIKIKQVPHDDILNKLQISYDMLEDEHKTLFLDIACFFKGWYKHKVIQILENCGFHPTLGINVLIEKSLVTFDGRVIGMHDMLEEMGKTIVFLESPNDPGKRSRLWSLEDIDEVLRKNKGTELVQGIVLKSSPSMSFEARWNPEAFSKMCNLRLLIILCDLHLSLGLKCLSSSLKVLIWRGYPMHTLPLGVQLDKLVHLQMNNSKVKQLWKGTQYFGKLKVIDLSNSKNLRQTPNVSGVPYLEELHLNDCTDLVEVHQSVKEHKKLEILSLIGCANLKTFSSTLEMDSLKTLILSDCSNISRLPEFGKNMISMSVLNLMHCKNIVCLPNSISNLKSLKILNISGCSKICSLPDGIRKNTALENLDLSRTAIGEMDPSLLQLGNLKILSLSGCGLPASDSRQDVSRPYRNRLRYFSDDTGLILPSTFSGLSSLTVLDLSYCNLTDDSIPEDIDGLSSLERLILSGNDFLRLPTCYFVNLSKLRYLELEDCPLLHSVPLLPPHACLYSTDSDAKESKILDPQKIWKLFESSNKELFLSPGSLIIDHPYPVYTEIPSRFDNHNFFPLSSSYVSEADSIASITLKIPTDCRSSNEWAVAVFVALEEIDEGLRAREKLLDNTKPDLKGNQCIGYLILLIIVIWLLICVWFRIPIKTSTRQMRMRWNFDTLEPEDASSLSLFASSTASNKLYMFTMVGSGDFIYIRRHTRGERKTMHKSFSKHRKPDFRENSLLHFEVQVEGCKIRKCGWRVLHKEDYLEELKEVNNGELSMAPSNSEHVSGMCKSTVDELKGENVENIEKSNENFSLGKIFQSIRQGLGLSMLIFMSMMVAATVFPLPVQGFGFKKHTATNEVQNKPFKSHRVSRKTVLKVITPQLQSSHRLNVSQRLSFPIYQLPTRTNFSQTHFCSYLTR | 1313 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi3g03746 | 1313 | Pfam | Leucine rich repeat | 829 | 873 | IPR001611 | GO:0005515 | |
Vivi3g03746 | 1313 | SMART | till_3 | 11 | 151 | IPR000157 | GO:0007165 | |
Vivi3g03746 | 1313 | Gene3D | - | 177 | 337 | IPR027417 | - | |
Vivi3g03746 | 1313 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 12 | 758 | IPR044974 | GO:0006952 | |
Vivi3g03746 | 1313 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 5 | 154 | IPR035897 | - | |
Vivi3g03746 | 1313 | ProSiteProfiles | TIR domain profile. | 10 | 176 | IPR000157 | GO:0007165 | |
Vivi3g03746 | 1313 | Coils | Coil | 124 | 144 | - | - | |
Vivi3g03746 | 1313 | SUPERFAMILY | L domain-like | 547 | 899 | - | - | |
Vivi3g03746 | 1313 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 177 | 440 | IPR027417 | - | |
Vivi3g03746 | 1313 | Gene3D | - | 346 | 430 | IPR042197 | - | |
Vivi3g03746 | 1313 | PRINTS | Disease resistance protein signature | 287 | 301 | - | - | |
Vivi3g03746 | 1313 | PRINTS | Disease resistance protein signature | 210 | 225 | - | - | |
Vivi3g03746 | 1313 | PRINTS | Disease resistance protein signature | 381 | 395 | - | - | |
Vivi3g03746 | 1313 | PRINTS | Disease resistance protein signature | 738 | 754 | - | - | |
Vivi3g03746 | 1313 | Gene3D | - | 5 | 176 | IPR035897 | - | |
Vivi3g03746 | 1313 | Pfam | NB-ARC domain | 193 | 412 | IPR002182 | GO:0043531 | |
Vivi3g03746 | 1313 | SUPERFAMILY | "Winged helix" DNA-binding domain | 417 | 521 | IPR036390 | - | |
Vivi3g03746 | 1313 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 8 | 178 | - | - | |
Vivi3g03746 | 1313 | Gene3D | Ribonuclease Inhibitor | 765 | 914 | IPR032675 | - | |
Vivi3g03746 | 1313 | Gene3D | Ribonuclease Inhibitor | 537 | 691 | IPR032675 | - | |
Vivi3g03746 | 1313 | Gene3D | Ribonuclease Inhibitor | 692 | 764 | IPR032675 | - | |
Vivi3g03746 | 1313 | Pfam | TIR domain | 11 | 183 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi3g03746 | Vivi-Chr3 | 63714978 | 63720396 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi3g03746 | 7 | 793 | WRKY Transcription Factor Family | AT4G12020 | 30.667 | 1.85e-95 | 337 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi3g03746 | - | - | psat:127083448 | 2392.08 |