Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03746 ATGGGAGATTGTTCACAAAACTCAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGAGGAGAAGATACACGATTAGGCTTCACGGATCACCTATATGCAGCTTTGGTGCGCAAGAGTATAATAACTTTCAGAGATGATGAAGAACTTGCAAGAGGTGAAGTAATCTCACAAAAGCTACTCCATGCCATTGAGGAATCACTCTCAGCAGTTGTTATTATCTCCAAAAACTATGCTAACTCAGCTTGGTGTTTGGATGAGTTAGTCAAGATTCTCGAATCCAAACGTTTGTCAGGACAACAAGTGTTCCCTATCTTCTATGGCGTGGATCCCTCCGATGTAAGAAATCAAAGGGCAAGTTTTGCTGAGGCTTTTAGGAAACATGAAGAAAAATTTGCTGAAAGCAAAGAGAAGGTGCAAAAGTGGAGAGATGCATTGAGAGAGGTCGCCAATTTGTCAGGCTGGGATTCTAAGGAGCAACATGAAACAAAACTCATTGAAGAAGTTGTTGCACAAGTATGGAAAAAACTGAAACTCAAATTCCCATCCTATAACGATGGACTGGTTGCAATTGATGCAAGATTGGAAGAATTATATTCAACTCTGAACATAGGATCGGAGGATGTTCGTTTCATAGGGATATGGGGCATGGGTGGGATAGGCAAAACGACTCTTACTACAGCTCTTTACAAAAAAATTAAAAGCCAGTTTGATGTAAGTTGCTTCATTGCTAATGTAAGGGAAGTTTCGGGGGAAAGAAACGATGGCATGCTACAGATACAAAATAAAATTCTTTCTCATTTGAACATAAAAGGAATGGTAATTGAAACATTAAGCGAAGGAAAGGACAGCTTAAGAAACCTTTTATCCAACAAAAAGGTTCTAATTGTCCTTGATGATGTAAGTTCTAAAAGCCAACTTGAGAATTTGGCTGGAAGCCAGGAATGGTTCGGTCGAGGGAGTAGAATTATAGTTACGACTAGGGATAAGCACCTCTTGATATCGCATGCTGTATTGTTTGAAATGTATGAGAGTAAAATCTTGAATAAAAGTGAATCCCTTCAACTTTTTTGTGAAAAAGCTTTTATGAAGGACAAGCCGGAAGAAGATTATTTAGAGTTATCCAAAAGTGTGGTCGAATATGCTGGAGGTCTTCCTTTGGCTTTTGAAGTGTTGGGTTCTTTTCTTTGCGGAAGAAGGATATCTGATTGGGAAGATGCTTTGATCAAAATCAAACAAGTTCCACATGATGATATCCTAAACAAACTTCAAATAAGTTATGACATGTTAGAAGATGAACACAAGACTTTATTTCTAGATATTGCCTGCTTTTTTAAGGGATGGTATAAACATAAAGTGATACAGATATTGGAAAATTGTGGCTTTCATCCAACACTTGGAATAAATGTTCTTATAGAAAAATCACTCGTAACCTTCGATGGAAGAGTTATTGGGATGCATGATATGCTAGAAGAAATGGGTAAAACCATAGTTTTTCTAGAATCTCCTAATGATCCCGGAAAACGGAGTAGATTGTGGTCTCTAGAGGATATTGATGAAGTACTAAGAAAAAATAAGGGAACTGAACTTGTTCAAGGTATTGTTTTGAAGTCATCACCATCTATGTCATTTGAAGCGCGTTGGAACCCCGAGGCCTTCTCAAAGATGTGTAATCTTAGGTTACTCATTATATTATGTGATTTGCATCTTTCACTTGGTCTGAAATGTCTTTCTAGCTCACTAAAAGTGCTTATATGGCGGGGATATCCAATGCATACTCTACCACTTGGAGTTCAACTGGATAAGCTTGTTCACTTACAGATGAACAATAGTAAAGTCAAACAACTGTGGAAAGGAACTCAGTATTTTGGGAAGCTGAAAGTAATCGATTTAAGTAATTCCAAAAATCTTCGTCAAACTCCAAATGTCTCTGGAGTTCCATACCTTGAAGAGCTGCATCTTAATGATTGTACAGACCTTGTTGAAGTTCACCAATCTGTTAAAGAGCACAAAAAGCTCGAGATATTGAGCTTGATAGGATGTGCGAATCTGAAAACCTTTTCAAGTACATTGGAAATGGATTCCTTGAAAACGCTCATTCTATCTGATTGCTCAAACATTTCACGACTTCCTGAATTTGGAAAAAATATGATAAGCATGTCAGTGCTTAATTTAATGCATTGTAAAAATATTGTGTGCCTTCCAAACAGCATTAGTAACCTGAAGTCTCTCAAAATTCTCAATATATCAGGATGCTCAAAAATTTGTAGCCTGCCAGACGGTATAAGGAAAAACACGGCTTTGGAGAATCTTGACTTGAGTAGGACTGCTATTGGAGAAATGGACCCCTCCCTACTTCAATTAGGGAATCTCAAAATATTATCTTTAAGTGGATGTGGCTTGCCAGCTTCCGACTCTCGACAGGACGTGAGTCGGCCATATAGGAATCGGCTAAGGTATTTCTCAGATGACACAGGCTTAATATTGCCTTCTACTTTCTCAGGTCTTTCCTCATTAACTGTTTTGGATTTGAGCTATTGTAATCTCACTGATGATTCAATTCCCGAAGACATTGATGGCTTATCATCATTGGAGAGACTAATTCTATCTGGGAATGATTTTCTGCGCCTACCCACTTGCTACTTTGTTAATCTTTCAAAGCTTCGCTATCTTGAATTGGAAGACTGTCCTCTGCTTCATTCTGTACCATTGCTTCCACCACATGCATGCTTGTACTCAACAGATTCAGATGCAAAGGAATCTAAAATATTGGATCCTCAAAAGATATGGAAGCTGTTTGAATCAAGCAACAAAGAACTCTTTCTCTCACCCGGGTCTTTGATAATTGATCATCCTTATCCTGTGTACACGGAGATCCCTTCGAGATTTGATAATCATAATTTTTTTCCCTTGAGCTCATCATATGTGTCAGAAGCTGACTCAATTGCATCAATAACCTTAAAGATCCCTACGGATTGTCGTTCAAGTAATGAGTGGGCAGTTGCTGTATTTGTGGCGTTGGAGGAAATTGATGAAGGCTTACGGGCCAGAGAAAAGCTGCTTGACAATACCAAACCAGATTTGAAGGGAAATCAATGCATTGGTTATTTAATCCTATTGATAATAGTGATTTGGCTATTAATCTGTGTATGGTTTCGTATTCCAATAAAAACTTCTACCAGACAAATGCGCATGCGTTGGAACTTTGATACTTTAGAACCTGAAGATGCCTCATCCTTATCTCTCTTCGCTAGTTCAACGGCAAGCAATAAACTGTACATGTTCACAATGGTAGGGAGTGGTGATTTTATCTACATTCGGCGACACACAAGAGGGGAGCGAAAGACCATGCACAAATCCTTTAGCAAGCATCGGAAGCCAGACTTCAGGGAAAACAGTTTGTTGCATTTTGAAGTGCAAGTGGAAGGGTGCAAGATTAGGAAGTGCGGATGGCGTGTGTTGCACAAGGAAGATTATCTTGAAGAACTTAAAGAGGTGAACAACGGTGAACTTTCTATGGCACCTTCAAATTCCGAGCATGTCAGTGGTATGTGCAAATCAACCGTGGATGAATTGAAGGGAGAGAATGTGGAGAACATAGAAAAATCCAATGAAAATTTCTCTTTGGGAAAAATATTTCAGAGTATTAGACAAGGACTAGGTTTAAGCATGCTAATTTTTATGTCAATGATGGTAGCTGCTACAGTATTCCCTCTGCCTGTGCAAGGTTTCGGCTTTAAAAAGCACACCGCAACAAATGAAGTCCAGAATAAACCATTTAAGTCACATCGGGTTTCCCGCAAAACTGTATTGAAGGTCATTACACCACAATTACAAAGCAGTCATAGATTAAATGTGAGCCAACGGTTGTCATTTCCAATATACCAGCTTCCAACGAGGACAAATTTCTCTCAGACTCACTTTTGTTCTTACTTAACTAGATGA 3942 0.3864 MGDCSQNSKWKYHVFLSFRGEDTRLGFTDHLYAALVRKSIITFRDDEELARGEVISQKLLHAIEESLSAVVIISKNYANSAWCLDELVKILESKRLSGQQVFPIFYGVDPSDVRNQRASFAEAFRKHEEKFAESKEKVQKWRDALREVANLSGWDSKEQHETKLIEEVVAQVWKKLKLKFPSYNDGLVAIDARLEELYSTLNIGSEDVRFIGIWGMGGIGKTTLTTALYKKIKSQFDVSCFIANVREVSGERNDGMLQIQNKILSHLNIKGMVIETLSEGKDSLRNLLSNKKVLIVLDDVSSKSQLENLAGSQEWFGRGSRIIVTTRDKHLLISHAVLFEMYESKILNKSESLQLFCEKAFMKDKPEEDYLELSKSVVEYAGGLPLAFEVLGSFLCGRRISDWEDALIKIKQVPHDDILNKLQISYDMLEDEHKTLFLDIACFFKGWYKHKVIQILENCGFHPTLGINVLIEKSLVTFDGRVIGMHDMLEEMGKTIVFLESPNDPGKRSRLWSLEDIDEVLRKNKGTELVQGIVLKSSPSMSFEARWNPEAFSKMCNLRLLIILCDLHLSLGLKCLSSSLKVLIWRGYPMHTLPLGVQLDKLVHLQMNNSKVKQLWKGTQYFGKLKVIDLSNSKNLRQTPNVSGVPYLEELHLNDCTDLVEVHQSVKEHKKLEILSLIGCANLKTFSSTLEMDSLKTLILSDCSNISRLPEFGKNMISMSVLNLMHCKNIVCLPNSISNLKSLKILNISGCSKICSLPDGIRKNTALENLDLSRTAIGEMDPSLLQLGNLKILSLSGCGLPASDSRQDVSRPYRNRLRYFSDDTGLILPSTFSGLSSLTVLDLSYCNLTDDSIPEDIDGLSSLERLILSGNDFLRLPTCYFVNLSKLRYLELEDCPLLHSVPLLPPHACLYSTDSDAKESKILDPQKIWKLFESSNKELFLSPGSLIIDHPYPVYTEIPSRFDNHNFFPLSSSYVSEADSIASITLKIPTDCRSSNEWAVAVFVALEEIDEGLRAREKLLDNTKPDLKGNQCIGYLILLIIVIWLLICVWFRIPIKTSTRQMRMRWNFDTLEPEDASSLSLFASSTASNKLYMFTMVGSGDFIYIRRHTRGERKTMHKSFSKHRKPDFRENSLLHFEVQVEGCKIRKCGWRVLHKEDYLEELKEVNNGELSMAPSNSEHVSGMCKSTVDELKGENVENIEKSNENFSLGKIFQSIRQGLGLSMLIFMSMMVAATVFPLPVQGFGFKKHTATNEVQNKPFKSHRVSRKTVLKVITPQLQSSHRLNVSQRLSFPIYQLPTRTNFSQTHFCSYLTR 1313
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03746 1313 Pfam Leucine rich repeat 829 873 IPR001611 GO:0005515
Vivi3g03746 1313 SMART till_3 11 151 IPR000157 GO:0007165
Vivi3g03746 1313 Gene3D - 177 337 IPR027417 -
Vivi3g03746 1313 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 758 IPR044974 GO:0006952
Vivi3g03746 1313 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Vivi3g03746 1313 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Vivi3g03746 1313 Coils Coil 124 144 - -
Vivi3g03746 1313 SUPERFAMILY L domain-like 547 899 - -
Vivi3g03746 1313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 440 IPR027417 -
Vivi3g03746 1313 Gene3D - 346 430 IPR042197 -
Vivi3g03746 1313 PRINTS Disease resistance protein signature 287 301 - -
Vivi3g03746 1313 PRINTS Disease resistance protein signature 210 225 - -
Vivi3g03746 1313 PRINTS Disease resistance protein signature 381 395 - -
Vivi3g03746 1313 PRINTS Disease resistance protein signature 738 754 - -
Vivi3g03746 1313 Gene3D - 5 176 IPR035897 -
Vivi3g03746 1313 Pfam NB-ARC domain 193 412 IPR002182 GO:0043531
Vivi3g03746 1313 SUPERFAMILY "Winged helix" DNA-binding domain 417 521 IPR036390 -
Vivi3g03746 1313 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 178 - -
Vivi3g03746 1313 Gene3D Ribonuclease Inhibitor 765 914 IPR032675 -
Vivi3g03746 1313 Gene3D Ribonuclease Inhibitor 537 691 IPR032675 -
Vivi3g03746 1313 Gene3D Ribonuclease Inhibitor 692 764 IPR032675 -
Vivi3g03746 1313 Pfam TIR domain 11 183 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi3g03746 Vivi-Chr3 63714978 63720396 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03746 7 793 WRKY Transcription Factor Family AT4G12020 30.667 1.85e-95 337
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03746 - - psat:127083448 2392.08