Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03695 ATGACGGAGGTGGCGAGAACAGTGGTTCATGAGGTTTTAGGAGATGGAATCATCGACGTCGATGAACCAATTGTCAGTTACATCGTTAACGTCCTCGCCGACGAGGACTTCGACTTCGGACTCGACGGCGAAGGCACCTTCGATGCTCTCGGAGATCTCCTCGTCGCCGCCGGATGTGTCCCCGACTTCTCCGAGTGTCGCTCCGTATGCAGCAAAATTTCAGATAGGTTTGGGAAGCACGGTTTGGTGAAGGCGAAGCCGACAGTACGAAGCCTTGCCGCGCCGTTTCGTATGAACGAGGGATTAGATGACGGTGAAGCTCCGAAGAGGAAGCCGGAGCCTGTCGACGGTCCTCTTTTGTCGGAACGCGATAAATTGAAGATCGAAAGGAGAAAGAGGAAAGACGAACGACAGAGAGAGGCTAAGTTCCAATTGCATTTGGCGGAGATGGAAGCGGTGAGAGCAGGGATGCCTGTTGCGTGTGTGAAGCACGAGAGCGGTGGTGGACACACTGTGAAGGATATTCATATGGATAATTTCACTATCTCTGTTGGTGGCCATGATCTCATTGTTGATGGTTCTGTTACACTCTCTTTTGGAAGACACTATGGGCTTGTTGGCAGAAATGGGACGGGAAAAACAACTTTCCTAAGGCATATGGCCATGCATGCCATAGACGGCATTCCCAGGAATTGTCAGATATTGCACGTTGAGCAAGAAGTCGTTGGTGATAATACATCCGCCTTACAGTGTGTTCTTAATACTGACATTGAAAGAGCCCAACTTCTGGAGGAAGAAGCTCAATTAATAGCCAAACAGAGAGAAGCGGAGGAGAGTACCGAAAAGGGCAATGATGCAAATGGAGCTGTGAAAGGCGATGCTATTTCACAAAGACTCGAGCAAATATACAAGAGGCTCGAGTTAATTGATGCTGATGCCGCCGAGTCACGGGCAGCATCTATACTTGCGGGTCTGAGTTTCTCTCCTGAGATGCAGAAGAAGGCAACAAAAACATTTTCTGGAGGATGGAGGATGCGTATAGCTCTTGCTCGTGCACTGTTTATAGAGCCTGATATGTTGCTTCTTGATGAACCTACGAACCATCTTGATCTTCACGCTGTCTTATGGCTTGAATCGTACTTGGTTAAATGGCCAAAAACATTTATTGTTGTTTCTCATGCTAGAGAATTTTTAAACACGGTAGTTACTGATATTATTCACTTACAAAACCAAAAGTTAACTACTTATAAAGGAAATTATGATACTTTTGAGAGGACTCGGGAAGAACAAATTAAAAACCAACAGAAAGCAGTAGAGGCACATGAGCGCTCAAGAGCTCATATGCAGACCTTCATTGACAAGTTCCGTTATAATGCCAAGAGGGCATCACTTGTTCAATCTAGAATCAAGGCTCTGGATCGATTGGGCCATGTAGATGCAATTATTAATGATCCTGACTACAAGTTTGAGTTCCCAACTCCTGATGATAGACCAGGTGCACCTATAATAAGTTTCAGCGATGCATCATTTGGTTATCCTGGAGGACCCATTCTATTTAGAAATTTGAACTTTGGGATTGATCTTGACAGCCGTATTGCAATGGTTGGACCGAATGGTATTGGTAAATCTACTATACTTAAGTTAATTGCTGGGGAGTTACAGCCAAGTTCTGGGACTGTCTTCCGTTCTGCCAAGGTTCGTATAGCAGTTTTCAGTCAGCACCATGTTGACGGACTTGACTTATCTTCAAATCCTCTTCTCTATATGATGCGCTGCTATCCTGGAGTTCCAGAGCAGAAACTTCGTGGTCACTTAGGTTCTTTTGGTGTAACCGGAAATCTTGCACTTCAACCGATGTATACTTTGTCAGGGGGTCAGAAAAGTAGAGTTGCCTTTGCAAAGATTACTTTTAAGAAGCCACACATAATATTGCTTGATGAGCCATCCAATCATCTGGATTTGGATGCTGTTGAGGCGCTGATTCAAGGTCTTGTGCTGTTCCAAGGAGGCATTCTCATGGTGAGTCACGACGAGCATCTCATCTCTGGTAGCGTGGAGGAGCTATGGATTGTATCCGAGGGAAGAGTGGCACCATTCCATGGCTCCTTCGGAGAGTATAAGAGGCTACTTCATTCATCTTAG 2142 0.4552 MTEVARTVVHEVLGDGIIDVDEPIVSYIVNVLADEDFDFGLDGEGTFDALGDLLVAAGCVPDFSECRSVCSKISDRFGKHGLVKAKPTVRSLAAPFRMNEGLDDGEAPKRKPEPVDGPLLSERDKLKIERRKRKDERQREAKFQLHLAEMEAVRAGMPVACVKHESGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDNTSALQCVLNTDIERAQLLEEEAQLIAKQREAEESTEKGNDANGAVKGDAISQRLEQIYKRLELIDADAAESRAASILAGLSFSPEMQKKATKTFSGGWRMRIALARALFIEPDMLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQNQKLTTYKGNYDTFERTREEQIKNQQKAVEAHERSRAHMQTFIDKFRYNAKRASLVQSRIKALDRLGHVDAIINDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFRNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRGHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVLFQGGILMVSHDEHLISGSVEELWIVSEGRVAPFHGSFGEYKRLLHSS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03695 713 Coils Coil 259 282 - -
Vivi3g03695 713 Gene3D - 467 712 IPR027417 -
Vivi3g03695 713 Gene3D - 137 448 IPR027417 -
Vivi3g03695 713 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 161 711 - -
Vivi3g03695 713 ProSitePatterns ABC transporters family signature. 339 353 IPR017871 GO:0005524|GO:0016887
Vivi3g03695 713 FunFam ATP-binding cassette sub-family F member 3 465 713 - -
Vivi3g03695 713 Pfam ABC transporter 194 367 IPR003439 GO:0005524
Vivi3g03695 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 712 IPR003439 GO:0005524
Vivi3g03695 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 435 IPR003439 GO:0005524
Vivi3g03695 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 439 IPR027417 -
Vivi3g03695 713 ProSitePatterns ABC transporters family signature. 622 636 IPR017871 GO:0005524|GO:0016887
Vivi3g03695 713 Pfam ABC transporter 406 487 IPR032781 -
Vivi3g03695 713 SMART AAA_5 199 412 IPR003593 GO:0016887
Vivi3g03695 713 SMART AAA_5 528 695 IPR003593 GO:0016887
Vivi3g03695 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 700 IPR027417 -
Vivi3g03695 713 CDD ABCF_EF-3 175 412 - -
Vivi3g03695 713 FunFam ABC transporter F family member 3 127 448 - -
Vivi3g03695 713 CDD ABCF_EF-3 503 695 - -
Vivi3g03695 713 MobiDBLite consensus disorder prediction 99 122 - -
Vivi3g03695 713 MobiDBLite consensus disorder prediction 102 122 - -
Vivi3g03695 713 Pfam ABC transporter 520 650 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03695 Vivi-Chr3 62680937 62689059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03695 465 664 Calmodulin-binding Proteins AT2G36910 27.155 5.79e-11 64.3