Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03651 ATGGACCCTAATCAATATAATTTTCAACAATCTATGTTCCATCTCATACAAAATCAGCAAAATTCTAATCCTCAAAATTCTCAATTTCCCCCACCACCAACAAACTCTACCGTATTTTTTTCGCCACCAAACAACCCAAATATGTATTTTAGACCACCTATAAATACTCATGGGATAAATTTTTCTCATCATGAACCCGAAACACCAAATGAGTTTATGTCCGAACGTCAAGTTCCACAATTTTCAACTCAAGTTGGTGTTGAAAATATTACAATTGATAAAGAACAAAGGCGTCCAGTTAAAAAAAAACCTCGAGAGGTATTCACAAGGGAAGAAGATACACTTCTTATGCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAAGTCGATAGCTTTTGGTTAAGAATCACCGATAATTATAACCAATATCGTGGGCAGTCACGAGAAAAGCTACAAGGCCAATTAAAATCTCGATGGCATCGAATAAATGGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTCATGGAAAAAAAAGTGGGGCATCGGAGAAAGATATCTTAGTCAATGCACATGCTTTTTTTGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGAGACTTTTAAAAGATGAACCTAAATGGATGGGAGCATGCACCGAAAATTCTTCAAAGAGAATAAAGAATTCTACTAGTGGTGCATACACGGCATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAATGGAGCGTCCAATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGGAAAATACAAATGCAACTGAACCTCCTTTTAGTGTTATTTCTGATACAATGAATAAAAGAATGGATTTAATGGAAAATCTAGCACGACTTAAGGAGGAAGAAAACAAATTAGTCAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTCTAAGATGAATGATACTCAGCGTGAATTTCATGAAAAACGTTGTAATAACCTAAAAGAAAAATATGGATGGTAA 1083 0.361 MDPNQYNFQQSMFHLIQNQQNSNPQNSQFPPPPTNSTVFFSPPNNPNMYFRPPINTHGINFSHHEPETPNEFMSERQVPQFSTQVGVENITIDKEQRRPVKKKPREVFTREEDTLLMQSWLNVSKDPIVGVDQKVDSFWLRITDNYNQYRGQSREKLQGQLKSRWHRINGLVQKFVGCYKQAVHGKKSGASEKDILVNAHAFFEQDEGAPFNLEYAWRLLKDEPKWMGACTENSSKRIKNSTSGAYTASPNSETPSSYEFNSSSPMERPMGQKAAKRKGKAKENTNATEPPFSVISDTMNKRMDLMENLARLKEEENKLVKEKMEFEAMQFIMSDTSKMNDTQREFHEKRCNNLKEKYGW 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03651 360 Coils Coil 295 329 - -
Vivi3g03651 360 PANTHER - 82 356 - -
Vivi3g03651 360 MobiDBLite consensus disorder prediction 240 294 - -
Vivi3g03651 360 MobiDBLite consensus disorder prediction 240 268 - -
Vivi3g03651 360 Pfam No apical meristem-associated C-terminal domain 210 349 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03651 Vivi-Chr3 61718277 61719359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03651 77 316 Glutathione S-transferase Gene Family AT5G41240 31.225 2.86e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03651 - - vvo:131607299 577.785