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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vivi3g03646
ATGAGAACAAAAAGCGTCAGCGTTGGCCGCCGGCGTAGCATTACGTCTTCCGTGACTCCCTCCGCCTCTCCCATTCCTCTCCTCTCCACCGTCCAGGACAACCACAACGCAACCGTCTACGACAGCGACAGCACCGGCGATCACACACATGCCGCACCACTTCCCAATTTCGTTCCCGATTCCGAACCACCAGATTCCTTTGACGATAACATTTGCATTACCTGCAACCGAGCCGGAGGACCGTTGCTAGTATGTACCCAAACGGATTGCCCCGTTGTAGTCCACGTCACCTGCATCGGTTCCGAACCTAAGTTCGATGATTCTGGAAACTTTTTCTGTCCTTACTGCTCCTACAAGCGAGCGTTGAAGAGAACTAGAGAATTAAGAGAAAAAGCGATTCTAGCGAAGAAAGCTCTTTCGAGCTTTTTGGAAAAAAGCCAAACAGTGCGTAAGGATGATGATGAAGAAGAAGAACACATTGCCGAACCAGAACCGGTTCAACCGGTTCAGGTTCAGGATGAACCGAACCATAATGAACCAGAACCGGTTCAAGTTGAACCGAACCGGAACGAACCAGAACCGGTTCAACCGGTTCAGGATGAACAGGATGTTTCTGATTCTGAGGAAAGAAGAGAACTAAATAGTAATGAAAATGATAAAGTTGAAGATAAAGGAAAGGTTTCTGTTTCAGGTAGTTCTGTCAGTGAAGCTAAAAATTCCGACTCGAATTCTGTCTCAGTGAAGAAAGGTCATGTCAATGCCAATGCCAAAGGCAAACGCAAGGTTGCTTATGTGAAAAAATCATTGCTACCGGAACGAAAAACTGGTGGTGCTGGTGGTGGTAGTGGCGGTGGTGATGGCGTGGATGAGGAGGAAGTTACCAGCTCTAGAACTTTTAGTGTACAAAAGCAAGTGTCGAAGCAGAATTTGATAACTGGAAAACGTAGGAGATTGCTTTGGACCGATGAAGAAGAAAAAGCTCTCAAGGAAGGAGTGTTGAAGTATTCAACTGAAAAGCAGAATATCCCTTGGAGGAAAATTTTAGAATTTGGTTGTCGTGTGTTTGATAAGACTCGGACTCCTGTTGATCTCAAGGATAAATGGAAGAACATTATCTCCAAAGAAGGTAAAATTACTAAGTTATAA
1146
0.452
MRTKSVSVGRRRSITSSVTPSASPIPLLSTVQDNHNATVYDSDSTGDHTHAAPLPNFVPDSEPPDSFDDNICITCNRAGGPLLVCTQTDCPVVVHVTCIGSEPKFDDSGNFFCPYCSYKRALKRTRELREKAILAKKALSSFLEKSQTVRKDDDEEEEHIAEPEPVQPVQVQDEPNHNEPEPVQVEPNRNEPEPVQPVQDEQDVSDSEERRELNSNENDKVEDKGKVSVSGSSVSEAKNSDSNSVSVKKGHVNANAKGKRKVAYVKKSLLPERKTGGAGGGSGGGDGVDEEEVTSSRTFSVQKQVSKQNLITGKRRRLLWTDEEEKALKEGVLKYSTEKQNIPWRKILEFGCRVFDKTRTPVDLKDKWKNIISKEGKITKL
381
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vivi3g03646
381
SMART
PHD_3
71
117
IPR001965
-
Vivi3g03646
381
MobiDBLite
consensus disorder prediction
1
22
-
-
Vivi3g03646
381
Gene3D
-
310
373
-
-
Vivi3g03646
381
ProSiteProfiles
Myb-like domain profile.
312
372
IPR001005
-
Vivi3g03646
381
SUPERFAMILY
Homeodomain-like
315
373
IPR009057
-
Vivi3g03646
381
SMART
sant
316
374
IPR001005
-
Vivi3g03646
381
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
60
161
IPR013083
-
Vivi3g03646
381
CDD
PHD_SF
71
116
-
-
Vivi3g03646
381
ProSitePatterns
Zinc finger PHD-type signature.
72
116
IPR019786
-
Vivi3g03646
381
ProSiteProfiles
Zinc finger PHD-type profile.
69
119
IPR019787
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vivi3g03646
Vivi-Chr3
61674211
61676726
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vivi3g03646
320
371
Single Myb Histone (SMH) Gene Family
AT5G67580
56.364
4.74e-08
52.4
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB-related
Vivi3g03646
Myb_DNA-binding
9.9e-07
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vivi3g03646
-
-
vvo:131655918
692.96
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