Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03600 ATGGAAGCAAAGAAAGGGGAGGCACTTAAAGCGATAGAGAATGCGGAGAAAAGGTTTGCTCATAGAGATTTTGTTGGAGCTAAAAATTACGCTTTAAAAGCGAAAACATTGTGTCCTGGATTGGAGGGTGTATCTCAGTTGGTGACCACTTTTGAAGTTTACATTGCCTCTCAAGTGAGTTGTAATGGTGAACTAGATTGGTATTCGATTATGGGGTTAAAGCCTTCGACGGATATAGAAGCTGTAAAGAAACAGTACAAGAAGATGGCGGGGTTGCTTCATCCGGATAATAATAAGTGTGTTGGAGCGGATGGGGCATTTCATCTTGTTTCTGAGGCGTGGGCCAGGCTGTCTGGTAGTTATGATATGAAGAAGAATGCGCAATTGGGTGCTGGGCATGGAGTTAATCACAATGGTTTGTCGACTGCTCGTGCCTCTGGTGGTAAGCGGGACACTTTCTGGACAATTTGTACTTCCTGCAAGGTTCAGTATGAGTATCTGCGCAAGTATATAAATAAGAAACTTTCTTGTAAAAATTGCCGTGGGGTTTTCATTGCTGTTGAAACAGCCCCGGCAAACGGTTCTTTTCCTTATTGTCCTTGGTCGTATGGGTCTAGCAGTGGATATGGAAGCCATTCCTATGATGGAGCTACATATGCTCCTAGTAATGGCACCTATTTCAACGGTAATGGAGTTGCCGGATACCATTCGCCACGCGGGTATGAGTATGCTTCTAATGTTCCTTGTCAATTGAACTCTGCTGGATATGTCAATCAAAATGGATTATCTACTTCACCTACTTGCCAGGCCAATGGGAATAGAAAGAGGGGAAGACCAAAAGTTAAATCAGAAGCTGATATGAAGCATTGCATGACAGAGACATTGGTTAATATTAATTCAGTTGTATCATTCTCCCAGAATGAACCGCAAGAGGTTAAGCCGAGTAGACCCGAGAAGAAAAGGAAAGTTCTTGGAGCCAGTTTAAGAAATGGCCATGAAGGAAAAGGCTCAAAATGTGCTTCAGAGTCAGCATTGGCTAATGGGAATGGAAGCATTGGGCATGGCCAGAAGCTTTCCAGTACAAGTGAAGTTCCAACCAAACAGTTTTCCATGGCACCAGCTTTTGATGCAAGAAAATTATTGATCGAGAAGGCCAGGACAGAAATAAGGAAAAAACTGGAAGAGATGAAGTTGGCATCAGAAGCTGCGGCTGCTGCTAATGAGAGAAAAAAATCTCAAATTGATGTTGATCAGGTCGAAGGAGGCGCATACATTAAAGCAGCTGTTAATGTTTCTGATAATCAGTTAGAACATAGAAAAACTGTTCCAGTGACAATTACTGTCCCAGATTCCGACTTTCATGATTTCGATAAAGATAGGTCAGAGCCATGCTTCAAACCAAAGCAAATATGGGCCTTGTATGATGAGGAGGACGGGATGCCCCGCTTGTATTGTCTGATCCGCGAGGTTGTCTCTGTCAACCCCTTCAAGATTAACATTAGTTACTTGAGTTCGAAAACTGATAGTGAGTTTGGCTCAGTAAACTGGCTTGTTTCAGGTTTCACTAAATCCTGTGGAAATTTCAGGGCCATGACCTCTGATGTTGTCGACCAAGTTAACATTTTTTCTCATGTTCTAAGCAGGGTGAAGGCCGGTCGAGGCGGTTGTGTTCGCATATATCCCAAATGCGGAGAAATTTGGGCTGTTTACCGAAACTGGTCTACAGATTGGAATCATTCTACACCAGATGAGGTAAGGCATCAGTATGATATGGTGGAGGTACTGGATGATTATTCCGAGGAGCTTGGTCTTTGTGTTAGCCCCCTTATTAAGTTGGACGGATTCAAAACCGTGTACAAGAGGAATGCAGACAAAAGTGCCATTAGATGGATACCAAGAAGAGAAATGTTGCGTTTTTCGCACCAAGTGCCTTTGTGGTTGTTGAAGGGTGAGGAAGCAAGCAATTTGCCCGACAAGTGTTGGGACCTTGATCCAGCTGCAACTCCCGATGAATTCCTTCATGCTGCTATAGAAACAAACGCATTGTAG 2049 0.4339 MEAKKGEALKAIENAEKRFAHRDFVGAKNYALKAKTLCPGLEGVSQLVTTFEVYIASQVSCNGELDWYSIMGLKPSTDIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKKNAQLGAGHGVNHNGLSTARASGGKRDTFWTICTSCKVQYEYLRKYINKKLSCKNCRGVFIAVETAPANGSFPYCPWSYGSSSGYGSHSYDGATYAPSNGTYFNGNGVAGYHSPRGYEYASNVPCQLNSAGYVNQNGLSTSPTCQANGNRKRGRPKVKSEADMKHCMTETLVNINSVVSFSQNEPQEVKPSRPEKKRKVLGASLRNGHEGKGSKCASESALANGNGSIGHGQKLSSTSEVPTKQFSMAPAFDARKLLIEKARTEIRKKLEEMKLASEAAAAANERKKSQIDVDQVEGGAYIKAAVNVSDNQLEHRKTVPVTITVPDSDFHDFDKDRSEPCFKPKQIWALYDEEDGMPRLYCLIREVVSVNPFKINISYLSSKTDSEFGSVNWLVSGFTKSCGNFRAMTSDVVDQVNIFSHVLSRVKAGRGGCVRIYPKCGEIWAVYRNWSTDWNHSTPDEVRHQYDMVEVLDDYSEELGLCVSPLIKLDGFKTVYKRNADKSAIRWIPRREMLRFSHQVPLWLLKGEEASNLPDKCWDLDPAATPDEFLHAAIETNAL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03600 682 Coils Coil 382 409 - -
Vivi3g03600 682 PANTHER BNAC03G44070D PROTEIN 1 669 - -
Vivi3g03600 682 Pfam DnaJ domain 66 118 IPR001623 -
Vivi3g03600 682 SUPERFAMILY Chaperone J-domain 59 120 IPR036869 -
Vivi3g03600 682 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Vivi3g03600 682 Gene3D DnaJ domain 54 124 IPR036869 -
Vivi3g03600 682 Pfam Domain of unknown function (DUF3444) 445 652 IPR024593 -
Vivi3g03600 682 SMART dnaj_3 65 122 IPR001623 -
Vivi3g03600 682 CDD DnaJ 66 118 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03600 Vivi-Chr3 60962366 60965518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03600 5 280 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.808 2.27e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03600 - - gmx:100792639 999.193