Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03517 ATGAGAGAAATGCAGAGTGAGGTAAAATGGGAGAAGAAGGAAGAAGAGGAAGAAAAAGAAGAAGCAGAAGCTCAAGTTGAAATTTGGAAATACATATTTGGTTTTGTAGAACTATCTGTGGTCAAATGTGCAATTCAACTTGGCATAGCTGAAGCCATTGAAAACCACAAAAAACCCATGTCACTATTAGAGTTATCATCATCACTAAAATGTGACCCTTCATATCTTAACCGCATCATGAGATTCCTAGTACATAGGAAAATATTCAAAACCATATCTACCAACCATGACAACTATCCCAGTTATGTTCAAACACCACTTTCTCGCCGTTTGATTCGTAACGGCGAACATAGCATGACTGCTCTTCTTTTATTAGAGAGCAGTCCTGTAATGGTAGCACCTTGGCTAAGTCTAAGTGACCGTGTTTTGGTAAATGGAAATCCATCTTTTAAGAAGGCTCATGGTGAAGATCTTTGGAGCTATGCTGCTTCAAATATTGATCATAGCAATCTTCTTAATGATGCTATGGCTTGTGATGCTAAAGTTGTTGTGCCTGCTATTGTTGAAGGTTGCAGTGAGTTGTTTGATGGTGTTGGATCATTAGTAGATGTTGGTGGTGGGAATGGTACCACCTTGAGCATCCTTGTTAAGGCTTTTCCTTGGATTCAAGGTATCAACTTTGACCTTCCTCATGTCATTGATGTGGCTCCAAAGTATGATGGGGTAGAACATGTGGCAGGTGACATGTTTACAAGTGTTCCCAAAGCTGATGTTGTATTTTTTAAGTGGGTTTTGCATGATTGGGGGGATGAAGAGTGCATCAAAATCTTAAAGAATAGTAGGGAAGCTATACCAAAAGAAAATGGAAAAGTGATTATTGTGGAAGCAGTTATAGAAGAAGAAGAAGGAGGAGGAAAACACAACAAGTATGAAGACGTAGGGTTAATGTTAGACATGGTGATGATGGCACATACGAACATTGGTAAAGAAAGAACACTGAAAGAGTGGGAACATGTGATTAAAATGGCTGGATTCAACAGATTCACTGTGAAATCTATCAATGCTGCACAGTCTGTAATTGTGGCCTCATGCTAA 1095 0.3909 MREMQSEVKWEKKEEEEEKEEAEAQVEIWKYIFGFVELSVVKCAIQLGIAEAIENHKKPMSLLELSSSLKCDPSYLNRIMRFLVHRKIFKTISTNHDNYPSYVQTPLSRRLIRNGEHSMTALLLLESSPVMVAPWLSLSDRVLVNGNPSFKKAHGEDLWSYAASNIDHSNLLNDAMACDAKVVVPAIVEGCSELFDGVGSLVDVGGGNGTTLSILVKAFPWIQGINFDLPHVIDVAPKYDGVEHVAGDMFTSVPKADVVFFKWVLHDWGDEECIKILKNSREAIPKENGKVIIVEAVIEEEEGGGKHNKYEDVGLMLDMVMMAHTNIGKERTLKEWEHVIKMAGFNRFTVKSINAAQSVIVASC 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03517 364 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Vivi3g03517 364 Pfam O-methyltransferase domain 135 346 IPR001077 GO:0008171
Vivi3g03517 364 CDD AdoMet_MTases 201 290 - -
Vivi3g03517 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 364 IPR016461 GO:0008168
Vivi3g03517 364 FunFam O-methyltransferase family protein 113 363 - -
Vivi3g03517 364 PANTHER O-METHYLTRANSFERASE 38 345 IPR016461 GO:0008168
Vivi3g03517 364 FunFam O-methyltransferase family protein 11 111 - -
Vivi3g03517 364 Gene3D Vaccinia Virus protein VP39 113 362 IPR029063 -
Vivi3g03517 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 361 IPR029063 -
Vivi3g03517 364 Coils Coil 1 32 - -
Vivi3g03517 364 Gene3D - 10 111 IPR036388 -
Vivi3g03517 364 PIRSF O-mtase 4 364 IPR016461 GO:0008168
Vivi3g03517 364 SUPERFAMILY "Winged helix" DNA-binding domain 18 115 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03517 Vivi-Chr3 59008819 59010290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03517 14 360 Monolignol Biosynthesis Gene Families AT1G77520 34.890 2.62e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03517 K22588 - gmx:100782951 464.922