Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03497 ATGAGCATAAATTCAAATGACACAGTGTTCAACAGAATCACAAGATTGAATGAAACAGGTTACGAAGTTTGTTATGATGCTCCACCCCATACTGTTTCAGATGGTTTATGGGGTGGAAAAGAAAATGGAAGAACTCCACTCAAATCTTTTGTTCCCTTGTTTGAATTACAAGTGCTTGTCATTTTCGCCCTCACCGAAATCACCACTTTGGTCCTCAAACCTCTGAGACTTCCTCCATTCATCTTACAAATGATTGCTGGTTTGATTATAGCCATTTTGTTTGAGGTGAAAGAAATAGAGAAATACATGACAGCGGTGTTTCCTTATGGAACTCATGACATAATTTCGGCGATTTCATCATTTGGTTTTGTGTTATTCATTTTCATAAACGGGGTACAAATGGATTTCAGCATGATAACGAGGACGGGAAACAAGGCATGGACAGTTTCGATTATTGGTTTGGTGGTACCATTATTTGTTGGTATTACACCATTACTAGTGTACCCTGAAAAAATAATAGCCATTGAGGTAAAAAACGGAAATGGAATTTATGTTGCATTGGTTTCTCATGCTATAAGTTCATTTGCGGTGATTGCTTCGCTTTTGAGTGAACTGCAAATCCAAAACTCCGAGCTTGGTAGATTGTCTTTGTCCTCGGCTTTAGTTAGTGACATATTGAGCACGGTTGTTACAACCAATATTATCGCGGTTAGGACTAATCCTAGTCTGAAAGTGGTTTCGAGAAACTTGATCTCGCTCTTTATACTTGCAGTATTCGTTCCATTAATATGCAGACCGATTATGTTTTGGATCATTAAACATACACCAGAAGGACGAAATGTCAAAGACGGTTACATTTATGTGATTATTGCATTGGTTTTTGCTTTAGGTGTTGTATCAGTTAAGATAGATCAAGAATTTGTCTTAGGAGTTTTCATTTTGGGACTTTCCGTTCCCGAAGGACCTCCTTTAGGATCTGCCTTGGTTAAGAAGCTTCAGTTCTTTGGACCGACGCTTCTTTTGCCTATCTTTGTGACTACTTCTGTATTGAAAGCAGATTTTTCAATCGATTTTTCATCGTTCGTTATGGTTTCTACCGGTATGGTGATTCTTTTGACTCATGTGGTTAAAATAGCAGCATGCTTTATAACTGCCCTCTGCTGCAAGATGCCTGTCAATGATGCTTTGTGCCTTTCCCTCATTTTGAACACCAAAGGTGTAATCGAAATCGGCGCCTACCATGCCTTATTCGACAATAATGTTATCGACGGGAAAACATATGGAGTTATGATGTTAAGTGTAATGATCATAGGAACCATTGTGCATTGGTCAGTGAAGTTTTTATATGATCCATCAAGGAAATATGCAGGATACCAAAAACGGAACATCGTTGGTTTAAAGCGAAACTCGGACCTGAGAATACTATTAACAGTTCAAAAACATAATCATATTTCAGGAGCAACAGATTTCTTAGACATATGTTGTCCAACAAATGAGAATCCACTCACAGTTGATGTGATTCATGTAATTGAGCTAGTTGGAAGAGCCTTACCTGTTTTCATTCCTCATTGCCTTCAAAGACAACTATCGAGATCCGCTTCGCATAAATCATATTCCGACGATGTCATTCTTGCTTTCGATATCTACGAGCACGAAAATCAAAATGCATTATCAATAAACACTTACACAGCAATCTCTCCTGCAAATCTCATGTATGAAGATGTTTGCAACCTAGCATTGGACAAAGTTGCATCCATCATAATTCTTCCTTTTCATATAAGATGGTCTAGCGACGGCGTTGTTGAATCCGACGACAAGAAAATACTCCGAGCGTTGAATCAAAAAGTCCTCGAAATAGCTCCATGTTCGGTCGGAATCCTCGTAACTCGCGCTAATTCGATACCAAAGACAGCATCATCAAACTCAGTAGCATTGGAATATTCCATTACTCGATTAGCCATCATTTATATAGGCGGATCAGACGACGATGAAGAAATTTTATGCTTAGCGAAACGAGCGATGAATAGTCCAAGGATCAAACTAGTTGTTTACCATCTTGTTGCTAAAGACTGCATAGCAGAATTGGAGGACTTAATGGTAACTGGTGAGGAAATGTTGCAAGAGCTGAAACATTCGGAAAATGTGAAGTATCAAGAGATTTTCACAAAGGATGGATCACAAACAGCTGGTTTTCTCCGTGACATAGTGACCGAACACGACTTTTTTATAGTCGGGAGAAGACACGGAAGCATGTCGCCTCAAACAGATGGATTGTCAGAATGGAGTGAGTTTCCAGAACTTGGTGCTATTGGAGATTTTCTATCATCACCTGATCTTAATAGTTGGGCTTCTGTTTTGGTAGTGCAGCAACAACTTTCGTGCAAGAATGAACTCAAAGGATGGGTTTTGTAG 2412 0.391 MSINSNDTVFNRITRLNETGYEVCYDAPPHTVSDGLWGGKENGRTPLKSFVPLFELQVLVIFALTEITTLVLKPLRLPPFILQMIAGLIIAILFEVKEIEKYMTAVFPYGTHDIISAISSFGFVLFIFINGVQMDFSMITRTGNKAWTVSIIGLVVPLFVGITPLLVYPEKIIAIEVKNGNGIYVALVSHAISSFAVIASLLSELQIQNSELGRLSLSSALVSDILSTVVTTNIIAVRTNPSLKVVSRNLISLFILAVFVPLICRPIMFWIIKHTPEGRNVKDGYIYVIIALVFALGVVSVKIDQEFVLGVFILGLSVPEGPPLGSALVKKLQFFGPTLLLPIFVTTSVLKADFSIDFSSFVMVSTGMVILLTHVVKIAACFITALCCKMPVNDALCLSLILNTKGVIEIGAYHALFDNNVIDGKTYGVMMLSVMIIGTIVHWSVKFLYDPSRKYAGYQKRNIVGLKRNSDLRILLTVQKHNHISGATDFLDICCPTNENPLTVDVIHVIELVGRALPVFIPHCLQRQLSRSASHKSYSDDVILAFDIYEHENQNALSINTYTAISPANLMYEDVCNLALDKVASIIILPFHIRWSSDGVVESDDKKILRALNQKVLEIAPCSVGILVTRANSIPKTASSNSVALEYSITRLAIIYIGGSDDDEEILCLAKRAMNSPRIKLVVYHLVAKDCIAELEDLMVTGEEMLQELKHSENVKYQEIFTKDGSQTAGFLRDIVTEHDFFIVGRRHGSMSPQTDGLSEWSEFPELGAIGDFLSSPDLNSWASVLVVQQQLSCKNELKGWVL 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03497 803 Coils Coil 692 712 - -
Vivi3g03497 803 Pfam Sodium/hydrogen exchanger family 59 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g03497 803 Gene3D - 54 456 IPR038770 -
Vivi3g03497 803 PANTHER CATION/H + ANTIPORTER 31 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03497 Vivi-Chr3 58659677 58662344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03497 11 791 Antiporter Super Family AT5G22900 34.499 1.05e-145 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03497 K26731 - mtr:11420455 1068.91