Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03481 ATGTTGCCTTTTTGCTCAGCCACTCCGTGTTATTCCCCTTCTTCTCAGATTCCGTTATTTGGGGGACTTCAATCCTTGTATCCAATTCGAAAAGATCTTGAGACTAGATGTGTTTTGGAAGAAAGTCTACATTTAGGTTTGCATTATGGAACACCTTCACTTAGAAATTCATTTGCAACACAAGCTATCAAAACTGTCTCAGCATTGGAAAATTCACCACTAACAGTAAATGGAGACTATTTACTTAGTAATAGTGAACAAAGGTATACTTTATCTACCGTCCCGGATGATCTCCTAGACTTTGCAAAACAGTCAGCTCAAGGTTCTGATGCATTAATACCATCAAGTACTACTGATATAACGCCGGGGAAGCTTGAATCTGTGCCTAGTTTGATTCAAGGTACAAAAGAAAGTGTCGGTGACCTTGTTTCTGGAATCAATGACTCATTCAGTGCCTCTATTAATAAGGGAGAAAATGCTTTCCGAAGCTCGGTGGATACGGTCACTAATTTTGTTGATTCCGTTGTTAAAAATGCTACTACGTCTGCTGATAATGCTTTTAGCAAGGTGTTTTCTGCTGTTGATCAAACAGGGGGATTAGCGAATAAGAAAATTACTGGCTTTTCAAGTGAGATAAATGGAGCCACAGGTAAGGCACCTGGTTTGGTTATTGATGTGTTGCGACGCTCTATTGTTGCGGTAGAGAATTCTTTATCAACTGGGGCTTCATATATTGTTTACCTATATGGGTCGGCCAAGGAGTTCCTTCCTGCAGAGATTAGGGATACGGTCGGAGTATATGAAGATAAAGCGACACAATTCTTGAGGCCTGTTGGATCTGGAACTCAACAGATATACACAGCTTTCTATTCATTGGAGAAGAGTCTCGGCTTTGATCCAAACGACCCAATTATTCCATTTGTTGTTTTTGTGGGCTCTTCAGCAACATTATGGGCTATTTATTGGTTGTGGAAATATGGAGGTTACTCAGGAGATTTATCCTCCAAATCAGCTTTTGAGCTCTTGGCTGGGGACTCAAATGCTGTACTCATAGATGTCCGCTCTGAGGAGTTGCGAGAAAAAGATGGTGTTCCTGATATTCGACGAGCAGCTCGCTTTCGCTATGCAAGTGTAACTCCAATTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGGGTGGTAGAGACCTGGATGACTCCTTGGTTGCTGTTGTTATTCAAAATTTGAAAATTGTTAAGGACAGTTCCAAGGTTATTGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATAGCAAGATCCTTGAAGAAAATTGGGATTAAGAATCCATACTTGGTTGAAGGTGGCTTTCAGTCTTGGGTGAAACAAAATCTCCGCATCAAGGAACTCAAACCTGAAACAGCACTTACCATACTTAATGAGGAAGCTGAAGCAATTCTAGCAGATATTATACCTTCTCCTTGGCAACTTTTAGGTTATGGTACGGCACTACTTGCGGGATCATATGCATTAGTAGAGTGGGAGAAAACATTGCAGTTAATTGGTGTTTTTGGCCTCAGTTTGACCATATATCTGCGGGTTTCTTCATATGAAAAGTCAGAAGATTTAAGGCAAGATGTGAGGTTGTTGCTTGCACCTGTTAAACTTGGAGGCCAGGCATTTTCATGGGCTGCTGGAAAATTGGAATCAAATGGCATAGGGTTACCTACATCACCTTCATCATTGGATGTTCAGAACCGGGTACTACAGGCTGCTGCCAAACATGAATCCCAACCATCTGATACTGAAGGTAACCAAGACCCAAATCCTGAATCCACTGTTACTCTCAACCAAAATGCTTGA 1842 0.4148 MLPFCSATPCYSPSSQIPLFGGLQSLYPIRKDLETRCVLEESLHLGLHYGTPSLRNSFATQAIKTVSALENSPLTVNGDYLLSNSEQRYTLSTVPDDLLDFAKQSAQGSDALIPSSTTDITPGKLESVPSLIQGTKESVGDLVSGINDSFSASINKGENAFRSSVDTVTNFVDSVVKNATTSADNAFSKVFSAVDQTGGLANKKITGFSSEINGATGKAPGLVIDVLRRSIVAVENSLSTGASYIVYLYGSAKEFLPAEIRDTVGVYEDKATQFLRPVGSGTQQIYTAFYSLEKSLGFDPNDPIIPFVVFVGSSATLWAIYWLWKYGGYSGDLSSKSAFELLAGDSNAVLIDVRSEELREKDGVPDIRRAARFRYASVTPIEVDGSIRKLLKGGRDLDDSLVAVVIQNLKIVKDSSKVIVLDADGTRSKGIARSLKKIGIKNPYLVEGGFQSWVKQNLRIKELKPETALTILNEEAEAILADIIPSPWQLLGYGTALLAGSYALVEWEKTLQLIGVFGLSLTIYLRVSSYEKSEDLRQDVRLLLAPVKLGGQAFSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDTEGNQDPNPESTVTLNQNA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03481 613 Pfam Rhodanese-like domain 343 455 IPR001763 -
Vivi3g03481 613 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 610 IPR044690 GO:0009704|GO:0071277|GO:0090333
Vivi3g03481 613 SMART rhod_4 334 459 IPR001763 -
Vivi3g03481 613 ProSiteProfiles Rhodanese domain profile. 344 462 IPR001763 -
Vivi3g03481 613 Gene3D - 329 483 IPR036873 -
Vivi3g03481 613 MobiDBLite consensus disorder prediction 583 613 - -
Vivi3g03481 613 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 317 460 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03481 Vivi-Chr3 58387090 58393595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03481 306 423 Sulfurtransferasese or Rhodanese AT5G23060 26.984 2.07e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03481 - - gmx:100786123 894.419