Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03450 ATGTATCCTTTATCTTTCTTTTTTACTTTATTCTTAAAGCTATTGGAAGCTAATATCAGTCCTTTTGTTTTGTTTTTATATCAGGACAAGCCCGAGCCACCTCCAGAGGGTCGCTTGCCTGATGCCACCAAGGGTTCTGACCATTTGAGGGATGTGTTTGGAAAAGCTATGGGGCTTAGTGATCAGGACATTGTTGCTCTATCTGGTGGTCACACCATTGGAGCTGCACACAAGGAGCGTTCTGGATTTGAGGGACCATGGACTTCTAATCCTCTCATTTTTGACAACTCATACTTCACGCAAGTCTTTTGA 312 0.4295 MYPLSFFFTLFLKLLEANISPFVLFLYQDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTQVF 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03450 103 ProSitePatterns Peroxidases proximal heme-ligand signature. 63 73 IPR019793 -
Vivi3g03450 103 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 28 100 IPR044831 GO:0004601|GO:0034599
Vivi3g03450 103 SUPERFAMILY Heme-dependent peroxidases 29 103 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi3g03450 103 Gene3D - 28 39 - -
Vivi3g03450 103 PRINTS Plant ascorbate peroxidase signature 38 55 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g03450 103 PRINTS Plant ascorbate peroxidase signature 57 78 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g03450 103 PRINTS Plant ascorbate peroxidase signature 79 103 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g03450 103 Pfam Peroxidase 38 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03450 103 PRINTS Haem peroxidase superfamily signature 63 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03450 103 PRINTS Haem peroxidase superfamily signature 87 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03450 103 Gene3D Peroxidase, domain 2 40 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03450 Vivi-Chr3 57796169 57796805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03450 38 77 Peroxidase AT5G42180 55.000 6.11e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03450 K00434 - vvo:131658131 206.838