Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03449 ATGCTGAAATCCTTAAGGAAAATCTTATCCCTTCGATCGAACTACTGCATCAAACAAAGAAGTGAACATGGTGAAAACTCAGTAGCTTTGCCTGTGCAGTTGCCAAACTGCAACGATTGTGATCACATCGTTGTCGAGGATAGAAAGAACAGTGCTACTGCAGAAGGCGCTCATGTCGATTCTAAGCATGACGCTAACGCTGATAGTTCTTTTGTGCATGCTGTTATCAACATGGTGGGAATGCTCATAGGTTTGGGGCAATTATCAACTCCTTATGCTGTTGAAAAAGGAGGTTGGGCATCTGCATTATTGCTTATAGGACTTGGGGTAATATGTGCTTATACATCTCACATACTTGGAAAATGTCTTGAAAAGAATCCAAAGTTAACAAGTTATGTGGATATTGGGAATCAAGCATTTGGAACAAAAGGAAGATACCTGGTTGCAACATTCATCTACATGGAAATCTTCATGGCACTTGTATCCTATACCATCTCATTACATGATAACTTGATCACAGTTTTTACAGGGACTCATCTAAAGATGAAATTTGCTACATTAACAACGTCGCAAATCCTAACCTTGGTGGCAATTTTGATTGCTTTGCCTAGTTTGTGGATCAGAGATATGTCGTCTATATCTTTCCTTTCAACTGGTGGAATTGTTATGTCTCTTCTCATTTTCGTGTGTGTAGCCGCCACTGCGATTTTCGGAGGAGGTGAAGGTAGTAATAATCATAGTATACCTATCTTCAAGCTACATAATATTCCATCAATATCTGGCCTTTATGTCTTTGGTTTAGGAGGACATATTGTGTTCCCTGATTTGTATAAATCCATGAAAGATCCCTCCAAGTTCACCAAGGTTTCAATGGTGAGCTTCACTATTGTTACAGTACTTTACACCTCAATGGGATTCATGGGTGCAAAAATGTATGGAAATGATGTTCAATCTCAGATAACTCTCAGCATGCCACCAAATCAAATTATAACAAAGATTGCTCTTTGGGCAACAGTGTTGACACCAATGACTAAATATGCACTTGAATTTGCACCCTTTGCAATTCATCTTGAGCATACACTTCCAAATTCTTTGAATGCGAGGACAAAATTGGTAATAAGGGGTTGTGTGGCTTCATTTTTGCTATTGACCATACTAGCCCTTGCTCTATCAGTGCCATATTTTGAACATGTACTTAGCCTCACTGGTTCACTAGTTAGTGTAGCCATTTGTTTGGTTTTTCCATGTGTTTTCTATTTGAAGATCTTTTGGGGTAACATTACAAGGTTTCTCTTAGTCCTTAATATTTTTTTAGTCATATTTGGGTTTCTTCTTAGTGGGATGGGTACCATTTCCTCCACAATGTTAATACTTCAAAAACTTATATCACATCATTCAACTTGA 1404 0.3818 MLKSLRKILSLRSNYCIKQRSEHGENSVALPVQLPNCNDCDHIVVEDRKNSATAEGAHVDSKHDANADSSFVHAVINMVGMLIGLGQLSTPYAVEKGGWASALLLIGLGVICAYTSHILGKCLEKNPKLTSYVDIGNQAFGTKGRYLVATFIYMEIFMALVSYTISLHDNLITVFTGTHLKMKFATLTTSQILTLVAILIALPSLWIRDMSSISFLSTGGIVMSLLIFVCVAATAIFGGGEGSNNHSIPIFKLHNIPSISGLYVFGLGGHIVFPDLYKSMKDPSKFTKVSMVSFTIVTVLYTSMGFMGAKMYGNDVQSQITLSMPPNQIITKIALWATVLTPMTKYALEFAPFAIHLEHTLPNSLNARTKLVIRGCVASFLLLTILALALSVPYFEHVLSLTGSLVSVAICLVFPCVFYLKIFWGNITRFLLVLNIFLVIFGFLLSGMGTISSTMLILQKLISHHST 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03449 467 PANTHER AMINO ACID TRANSPORTER 57 450 - -
Vivi3g03449 467 Pfam Transmembrane amino acid transporter protein 69 452 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03449 Vivi-Chr3 57767248 57769123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03449 65 465 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.396 1.51e-159 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03449 - - lang:109342470 626.706