Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03445 ATGGTAGATGAGGGTGGTTTGATCATGTTTCCAATGGAGAAGAGAGCGTTGGAGTGTGTTGGTAAAGGCTTTGATCTAACAAGTGATTTTCGAATGAAATTCGCGAAAGGATTGATGAATGGTGGAAGGTTAGTGGTGGTTGATGAAGTAAACAAGAGAGATGTTATTGTCCCTGGTGGAGTTATCATTCCAGATGTTTCCGAGGATATTCGGTTCGACAGAGGTGATCGCGTTCGGTTCAAATCCGATGTTCTTCCATTCAATCAGATGTCTGAAATGGTTAATCAGAAATCAGCTATACCAGGAAAAATTCCTTCGGGCTATTTCAACGCGGTTTTTGATTTGAGTGGCGATTGGTTCCGCGACGCGCAAGAGATTAAATCTCTTGCTTTTGATGGTTACTTCATTTCTCTTTACTATTTGCACTTAACTGCTTCACACCTGAAACTTCAAGAGGAAGTCAAAAAGTCTGTTCCAGCACAGTGGGATCCAGCTTCTTTGTCCAGGTTTATTGTGACATATGGTACACACATAATAGTAGGCATGGGTGTTGGAGGACAAGATGTAATATGTGTCAAACAAAAACATTCTTCGAAGGTTCCTCCGGGTGATCTCAGAAGACATTTAGACGATTTAGGCGATTTTTTATTTTCAGATTTAAGGAGTCCTTCTCTACTCGACAGGAAGACGACAATAGAAGACAAACAAAAAGTCCCAGAAGTTTTTAACCGTGTGATGCAATCAAGCACGACGCAGTTTACAAGTATTTCAGAAACATCAAGCAAAGATGGCCTCACTATTATTTGCTCAAAAAGAGGAGGAGATGTGTTTAAGCACAATCATTCAAGTTGGCTCCAAACAATGGCTTCTAGTCCTGAAGCAATCCATTTCAAGTTTGTTCCTATTTCATCGCTTCTCACCGGAATTCCTGGAAGCGGCTATCTTAGTCATGCAATCAATTTGTATTTAAGATATAAGCCCTCTACGGAAGACTTACAATATTTCTTGGAGTTTCAAATTCCCAGAGAATGGGCACCGATGTTTTCTGAGCTTCCTCTGAGGCATCAAAGGAAAAAACCTCATTCTCCTCCACTGCAATTTAGTTTCATGTCTCCAAAACTTCATATCAACTCTACACAGGTAGTAAGTGAACAAAAACCCGTGGTTGGCCTCCGATTATACTTGGAGGGAAGGAAATGTGATAAACTTGCAATACATATACATCATCTCTCAAGCCTTCCAAATACAATGGAACTCTCTTCAACTACTACTAGTACACCTATGTGGCGAGGATCCGACAATGATGAATCGAGTAACCAATTCGCGGAACCAATAAGATGCAAGAGATTCGCGCACGTCTGCACTTCAGTGGTTAAGTATGACCCTGACTGGTTGCACGAATCAAATTCAACCGGTGTTTATATCGTGACCGGTGCTCAACTCATTAGCAAAGGGAATTGGCCAAAGAATATGCTTCATTTGCGCCTTCTCTACACTCACATACCGAATTGCAGCATCAGGAAAACCGAATGGGCTTCTGCGCCAGAAGCTTCGAGAAAATCGTCTTTCTTCACAAATCTGAGCACAACATTTTCATTCACACAACAAAGTGTTACTGCCACACAGAAACAGGCTGCTCCAACTGCACTTAACTCTGGTGTTTATCCGGATGGTCCGCCCGTGCCTGTTCGTTCTGCTAAAATGCTTAAATATGTGGAGACGAGCGAGGTTTTGCGCGGTCCACATGATGCTCCCGGGCATTGGTTGGTAATTGCTGCTAAGCTTGTGACTGAAGGTGGCAAAATTGGATTACAGCCAGTTCTTCCTGATGAAAGAGAGAGGATTGAAGCAGCTGGTGGAAAAGTGATTAATTGGAATGGAAGTCGCGTTCTAGGAATTCTTGCTACTTCTAGATCCATAGGGGATCATTGCATGAAGCCATTTGTGATATCTCAACCAGAGATCAACGTGCATGGAAGAACAAAATCAGATGAGTTTGTTGTGGTGGCAAGTGACGGTCTTTGGGATGTTGTATCAAACAGTTTTGTTTGTGAAGTGGTAAAAAGCTGTCTCCAAGGTCATATGAGGAGGAATCATAGTGATGCTGCTGCAATTCTAGCTGAATTGGCTATGGCTAAGGGAAGCAAAGACAACATCAGTGTTATAGTCATCCAACTCAACAACACTAACATTTGA 2196 0.4217 MVDEGGLIMFPMEKRALECVGKGFDLTSDFRMKFAKGLMNGGRLVVVDEVNKRDVIVPGGVIIPDVSEDIRFDRGDRVRFKSDVLPFNQMSEMVNQKSAIPGKIPSGYFNAVFDLSGDWFRDAQEIKSLAFDGYFISLYYLHLTASHLKLQEEVKKSVPAQWDPASLSRFIVTYGTHIIVGMGVGGQDVICVKQKHSSKVPPGDLRRHLDDLGDFLFSDLRSPSLLDRKTTIEDKQKVPEVFNRVMQSSTTQFTSISETSSKDGLTIICSKRGGDVFKHNHSSWLQTMASSPEAIHFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSTEDLQYFLEFQIPREWAPMFSELPLRHQRKKPHSPPLQFSFMSPKLHINSTQVVSEQKPVVGLRLYLEGRKCDKLAIHIHHLSSLPNTMELSSTTTSTPMWRGSDNDESSNQFAEPIRCKRFAHVCTSVVKYDPDWLHESNSTGVYIVTGAQLISKGNWPKNMLHLRLLYTHIPNCSIRKTEWASAPEASRKSSFFTNLSTTFSFTQQSVTATQKQAAPTALNSGVYPDGPPVPVRSAKMLKYVETSEVLRGPHDAPGHWLVIAAKLVTEGGKIGLQPVLPDERERIEAAGGKVINWNGSRVLGILATSRSIGDHCMKPFVISQPEINVHGRTKSDEFVVVASDGLWDVVSNSFVCEVVKSCLQGHMRRNHSDAAAILAELAMAKGSKDNISVIVIQLNNTNI 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03445 731 SUPERFAMILY PP2C-like 605 728 IPR036457 -
Vivi3g03445 731 ProSiteProfiles PPM-type phosphatase domain profile. 586 726 IPR001932 -
Vivi3g03445 731 Pfam Protein phosphatase 2C 606 719 IPR001932 -
Vivi3g03445 731 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 13 605 IPR044663 GO:0006952|GO:0012501|GO:2000031
Vivi3g03445 731 SMART MACPF_8 126 324 IPR020864 -
Vivi3g03445 731 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 3 336 IPR020864 -
Vivi3g03445 731 SMART PP2C_4 163 724 IPR001932 -
Vivi3g03445 731 Pfam MAC/Perforin domain 109 322 IPR020864 -
Vivi3g03445 731 CDD PP2Cc 606 726 IPR001932 -
Vivi3g03445 731 Gene3D - 603 730 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03445 Vivi-Chr3 57756008 57761018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03445 605 726 PP2C-type Phosphatase Gene Family AT2G29380 46.617 2.02e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03445 - - vvo:131655839 1420.22