Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03409 ATGCTGAAATCCTTGAGGAAAGTCTTATCCCTTCGATCGAACTACTGTATGAAACAAAGGAGTGAACATGGTGAAAACTCAGTAGCTTTGCCTGTGCAGTTGCCAAACTGCAACGATTGTGACCACATCGTTGTCGAGGATAGAGAGAACAGTACTACTGCAGAAGACGCTCATGTCGACTCTAAGCATGACGCTAATGCTGATAGTTCTTTTGTTCATGCTGTTATCAACATGGTGGGAATGCTCATAGGTTTGGGGCAATTATCAACCCCTTATGCTGTTGAAAAAGGAGGTTGGGCATCTGCATTATTGCTTATAGGACTTGGGGTAATATGTGCTTATACATCTCACATACTTGGAAAATGTCTTGAAAAGAATCCAAAGTTAACAAGTTATGTGGATATTGGGAATCAAGCATTTGGAACAAAAGGAAGATACCTAGTTGCAACATTCATCTACATGGAAATCTTCATGGCACTTGTATCCTACACCATCTCATTACATGATAACTTGATCACAGTGTTTATAGGGACTCATCTGAAGATGAAATTTGCCACGTTAACAACGTCGCAAATCCTAACCTTGGTGGCAATCTTGATTGCTTTGCCTAGTTTGTGGATCAGAGATATGTCGTCTATATCTTTCCTTTCAACCGGTGGAATTGTTATGTCTCTTCTCATTTTCGTGTGTGTAGCCGCCACTGCGATTTTCGGAGGAGGTGAAGGTAGTAATAATCATAGTATACCTATCTTCAAGCTACATAATATTCCATCAATATCTGGCCTTTATGTCTTTGGTTTAGGAGGACATATTGTGTTCCCTGATTTGTATAAATCCATGAAAGACCCCTCCAAGTTCACCAAGGTTTCAATTGTGAGCTTCACTATTGTTACATCAGTTTACACTTCAATGGGATTCATGGGTGCAAAAATGTATGGAAATGATGTTCAGTCACAGATAACTCTCAGCATGCCACCAAATCAAATTATAACAAAGATTGCTCTATGGGCAACAGTGTTGACACCAATGACTAAATATGCACTTGAATTTGCACCCTTTGCAATTCATCTTGAACACACACTTCCAAATTCTTTGAATGCCAGGACAAAATTGGTAATAAGGGGTTGTGTGGCTTCATTTTTGCTATTGATCATACTAGCCCTTGCTCTATCAGTGCCATATTTTGAACATGTACTTAGCCTCACTGGTTCACTAGTTAGTGTAGCCATTTGTTTGGTTTTTCCATGTGTTTTCTATTTGAAGATCTTTTGGGGTAACATTACAAGGTTTCTCTTAGTCCTTAATATTTTTTTAGTCATATTTGGGTTTCTTCTTGGTGGGATGGGTACCATTTCCTCCACAAAGTTAATACTTCAAAAACTTATATCACATCATTCAACTTGA 1404 0.3868 MLKSLRKVLSLRSNYCMKQRSEHGENSVALPVQLPNCNDCDHIVVEDRENSTTAEDAHVDSKHDANADSSFVHAVINMVGMLIGLGQLSTPYAVEKGGWASALLLIGLGVICAYTSHILGKCLEKNPKLTSYVDIGNQAFGTKGRYLVATFIYMEIFMALVSYTISLHDNLITVFIGTHLKMKFATLTTSQILTLVAILIALPSLWIRDMSSISFLSTGGIVMSLLIFVCVAATAIFGGGEGSNNHSIPIFKLHNIPSISGLYVFGLGGHIVFPDLYKSMKDPSKFTKVSIVSFTIVTSVYTSMGFMGAKMYGNDVQSQITLSMPPNQIITKIALWATVLTPMTKYALEFAPFAIHLEHTLPNSLNARTKLVIRGCVASFLLLIILALALSVPYFEHVLSLTGSLVSVAICLVFPCVFYLKIFWGNITRFLLVLNIFLVIFGFLLGGMGTISSTKLILQKLISHHST 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03409 467 PANTHER AMINO ACID TRANSPORTER 56 450 - -
Vivi3g03409 467 Pfam Transmembrane amino acid transporter protein 69 451 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03409 Vivi-Chr3 57285703 57287658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03409 37 465 Amino Acid or Auxin Permease AAAP Family AT5G16740 57.834 3.68e-161 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03409 - - lang:109342470 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03409 3 57285703 57287658 Vivi3g03409 3 57285703 57287658 ECH