Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03371 ATGGTAATGGTTATGGCAGAGGAAGAAGAGAACGCGTTATCGAGCGAACCAGAATTTCCGAAGAGTCGAGTGAAGAAGATAATGACACTGGACAAAGACGTGAAGAGAGTGAGTTCAGAAGCGTTGTTTCTGGTGTCGAGATCTACGGAGCTTTTTCTACAGTTACTTGCTGAAAAGTCTGCGGAAGTCGCAATTGAGAAGAAACGGAAGACGGTGAAGCTTGAACATATAAGAATCGCGGTGAAGAGGAATCGGCATGTAAGTGATTTTCTTCTCGATTCGCTTCCTTTGCCTTCTGAAGGAACTAAATCTGATAATCCCGCGGCCGTTGTTGTTGATAAAGGAAAATCTGTTCCGGTTGGTACTCGCCGGATTGATCATATATTCCGAAAATCGGAAGCTCAAGTTGAAGCCGAGGCGCCTGAACCGGTGCCTGAACCTATGGAAGAGTCATAG 456 0.4561 MVMVMAEEEENALSSEPEFPKSRVKKIMTLDKDVKRVSSEALFLVSRSTELFLQLLAEKSAEVAIEKKRKTVKLEHIRIAVKRNRHVSDFLLDSLPLPSEGTKSDNPAAVVVDKGKSVPVGTRRIDHIFRKSEAQVEAEAPEPVPEPMEES 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03371 151 MobiDBLite consensus disorder prediction 132 151 - -
Vivi3g03371 151 SUPERFAMILY Histone-fold 16 84 IPR009072 GO:0046982
Vivi3g03371 151 Gene3D Histone, subunit A 2 96 IPR009072 GO:0046982
Vivi3g03371 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 18 81 IPR003958 -
Vivi3g03371 151 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 8 102 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03371 7 138 CCAAT-HAP5 Transcription Factor Family AT5G43250 56.061 3.80e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Vivi3g03371 CBFD_NFYB_HMF 3.1e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03371 - - vun:114164970 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03371 3 56728337 56728950 Vivi3g03371 3 56728337 56728950 ECH